RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 PFKMP08237 780 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 ACTN1P12814 892 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 EIF2AK2P19525 551 aaKnown RBP8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 RXRAP19793 462 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 MCM5P33992 734 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 NT5C2P49902 561 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 EXOSC10Q01780 885 aaKnown RBP8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 BAATQ14032 418 aaPredicted RBP8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 USH1GQ495M9 461 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 DUSP28Q4G0W2 176 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 CASC1Q6TDU7 716 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 NSMFQ6X4W1 530 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 RAB11FIP4Q86YS3 637 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 RETREG2Q8NC44 543 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 OR13H1Q8NG92 308 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 PHOSPHO2Q8TCD6 241 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 EDEM1Q92611 657 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 TTC9Q92623 222 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 SMG9Q9H0W8 520 aaKnown RBP8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 CYP39A1Q9NYL5 469 aa8.1□□□□□ -1.11
TRIM53CP-201ENST00000531490 TRIOO75962 3097 aa8.09□□□□□ -1.11
TRIM53CP-201ENST00000531490 USP34Q70CQ2 3546 aa8.09□□□□□ -1.11
TRIM53CP-201ENST00000531490 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 ERICH2A1L162 156 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 SH2B2O14492 632 aaPredicted RBP8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 PPP1R11O60927 126 aaPredicted RBP8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 SUPT20HL2P0C7V6 817 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 NPR3P17342 541 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 HSPA4P34932 840 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 WDR5P61964 334 aaKnown RBP8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 DNM1Q05193 864 aaKnown RBP8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 GRM4Q14833 912 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 CDC37Q16543 378 aaPredicted RBP8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 QRICH1Q2TAL8 776 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 TKFCQ3LXA3 575 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 ASPRV1Q53RT3 343 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 DMRTC2Q8IXT2 367 aaPredicted RBP8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 OR6J1Q8NGC5 347 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 PIBF1Q8WXW3 757 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 KCNB2Q92953 911 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 SNX27Q96L92 541 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 NEK1Q96PY6 1258 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 CTAGE1Q96RT6 745 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 MTG1Q9BT17 334 aaPredicted RBP8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 USP26Q9BXU7 913 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 VTA1Q9NP79 307 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 Q9Y3F1 56 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 SNX14Q9Y5W7 946 aa8.09□□□□□ -1.12
TRIM53CP-201ENST00000531490 A0A0A0MRY4 1105 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 DHX16O60231 1041 aaKnown RBP8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 CALML3P27482 149 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 LIFRP42702 1097 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 KCNJ6P48051 423 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 SART3Q15020 963 aaKnown RBP8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 GRIK4Q16099 956 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 LEXMQ3ZCV2 418 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 TTC39BQ5VTQ0 682 aaPredicted RBP8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 SLC30A10Q6XR72 485 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 CATIPQ7Z7H3 387 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 ZNF654Q8IZM8 581 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 SRBD1Q8N5C6 995 aaKnown RBP8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 PLD4Q96BZ4 506 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 MTMR8Q96EF0 704 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 PIGSQ96S52 555 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 C17orf80Q9BSJ5 609 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 RIOX1Q9H6W3 641 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 BRPF3Q9ULD4 1205 aa8.08□□□□□ -1.12
TRIM53CP-201ENST00000531490 LRRC37A2A6NM11 1700 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 CACNA1AO00555 2505 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 hCG_1642624A0A1W2PR95 340 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 PTPDC1A2A3K4 754 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 LINC01553A4QN01 128 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 NBNO60934 754 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 PLEKHA8P1O95397 391 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 ABL1P00519 1130 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 PDGFAP04085 211 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 MZF1P28698 734 aaPredicted RBP8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 RFC2P35250 354 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 ERVK-21P61565 698 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 RPS6P62753 249 aaKnown RBP8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 PTGISQ16647 500 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 GDF6Q6KF10 455 aaPredicted RBP8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 PDE12Q6L8Q7 609 aaKnown RBP8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 NFXL1Q6ZNB6 911 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 RNF207Q6ZRF8 634 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 FBXO11Q86XK2 927 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 HOMER1Q86YM7 354 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 TMTC2Q8N394 836 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 MORC4Q8TE76 937 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 DHX38Q92620 1227 aaKnown RBP8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 TMEM87BQ96K49 555 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 TAAR1Q96RJ0 339 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 SEZ6LQ9BYH1 1024 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 ABI2Q9NYB9 513 aaPredicted RBP8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 TMEM63CQ9P1W3 806 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 COL20A1Q9P218 1284 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 CFAP54Q96N23 3096 aa8.07□□□□□ -1.12
TRIM53CP-201ENST00000531490 GBF1Q92538 1859 aa8.06□□□□□ -1.12
TRIM53CP-201ENST00000531490 MYH7BA7E2Y1 1941 aa8.06□□□□□ -1.12
TRIM53CP-201ENST00000531490 ZDBF2Q9HCK1 2354 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms