RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 MYH15Q9Y2K3 1946 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 ATRXP46100 2492 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 TMEM150BA6NC51 233 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 hCG_1984214I3L0E3 225 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 ZBTB43O43298 467 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 DARSP14868 501 aaKnown RBP10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 EPCAMP16422 314 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 HOXB8P17481 243 aaPredicted RBP10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 EIF4BP23588 611 aaKnown RBP10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 ADD1P35611 737 aaKnown RBP10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 PPM1AP35813 382 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 ZNF76P36508 570 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 PFKFB3Q16875 520 aaPredicted RBP10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 EFCAB12Q6NXP0 572 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 TMC7Q7Z402 723 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 CKAP2LQ8IYA6 745 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 ZNF713Q8N859 430 aaPredicted RBP10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 GJA10Q969M2 543 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 CEP89Q96ST8 783 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 ZMYND12Q9H0C1 365 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 ANO2Q9NQ90 1003 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 SPG21Q9NZD8 308 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 SORCS3Q9UPU3 1222 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 AKT3Q9Y243 479 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 PCDHA10Q9Y5I2 948 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 COL4A3Q01955 1670 aa10.41□□□□□ -0.74
CHMP4A-205ENST00000531158 TPRP12270 2363 aaKnown RBP10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 NID2Q14112 1375 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 ACACBO00763 2458 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 A0A0U1RQF3 1178 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 KLF18A0A0U1RQI7 1052 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 ESYT2A0FGR8 921 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 GOLGA8AA7E2F4 631 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 GOLGA8BA8MQT2 603 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 MSH4O15457 936 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 STBD1O95210 358 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 OATP04181 439 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 SRGAP2BP0DMP2 458 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 CPA1P15085 419 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 METAP2P50579 478 aaKnown RBP eCLIP10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 BCAR1P56945 870 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 MTMR3Q13615 1198 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 SMC1AQ14683 1233 aaKnown RBP10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 ACAP1Q15027 740 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 TARBP2Q15633 366 aaKnown RBP10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 PRR16Q569H4 304 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 ODR4Q5SWX8 454 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 CWF19L1Q69YN2 538 aaKnown RBP10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 ZBTB33Q86T24 672 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 SMAP1Q8IYB5 467 aaPredicted RBP10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 RNF169Q8NCN4 708 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 SLC22A17Q8WUG5 538 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 CASP10Q92851 521 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 ZBP1Q9H171 429 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 TBC1D22BQ9NU19 505 aa10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 PUF60Q9UHX1 559 aaKnown RBP10.4□□□□□ -0.74
CHMP4A-205ENST00000531158 PATJQ8NI35 1801 aa10.4□□□□□ -0.75
CHMP4A-205ENST00000531158 CACNA1IQ9P0X4 2223 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 MIA3Q5JRA6 1907 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 MAGEB2O15479 319 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 HOXA2O43364 376 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 PSAPP07602 524 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 CIITAP33076 1130 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 SETQ01105 290 aaPredicted RBP10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 PRKCEQ02156 737 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 ITIH3Q06033 890 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 LONRF3Q496Y0 759 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 RARS2Q5T160 578 aaKnown RBP10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 KIAA1841Q6NSI8 718 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 DHX32Q7L7V1 743 aaKnown RBP10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 UBALD2Q8IYN6 164 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 REXO1Q8N1G1 1221 aaKnown RBP10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 LPPQ93052 612 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 SH2D3AQ9BRG2 576 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 RNF216Q9NWF9 866 aaPredicted RBP10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 DNAJB4Q9UDY4 337 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 CEP131Q9UPN4 1083 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 NR2E1Q9Y466 385 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 IRAK3Q9Y616 596 aa10.39□□□□□ -0.75
CHMP4A-205ENST00000531158 IGKV6-21A0A0C4DH24 114 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 WDR64B1ANS9 1081 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 PI15O43692 258 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 EOMESO95936 686 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 ZSCAN20P17040 1043 aaPredicted RBP10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 NPR3P17342 541 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 PHKA2P46019 1235 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 AFF1P51825 1210 aaKnown RBP10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 RCAN1P53805 252 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 KRT17Q04695 432 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 NTRK3Q16288 839 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 TSGA10IPQ3SY00 556 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 TPRNQ4KMQ1 711 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 B3GNT9Q6UX72 402 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 SYNE3Q6ZMZ3 975 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 ZDHHC14Q8IZN3 488 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 ABI1Q8IZP0 508 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 VPS52Q8N1B4 723 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 SLC5A5Q92911 643 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 PHKBQ93100 1093 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 CHAMP1Q96JM3 812 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms