RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 PLIN2Q99541 437 aa20.84■□□□□ 0.93
GMDS-208ENST00000530927 POLR3FQ9H1D9 316 aaPredicted RBP20.84■□□□□ 0.93
GMDS-208ENST00000530927 DBR1Q9UK59 544 aaKnown RBP20.84■□□□□ 0.93
GMDS-208ENST00000530927 E9PMD0 336 aa20.83■□□□□ 0.93
GMDS-208ENST00000530927 DGAT1O75907 488 aa20.83■□□□□ 0.93
GMDS-208ENST00000530927 LINC00271P0C7V0 271 aa20.83■□□□□ 0.93
GMDS-208ENST00000530927 GLRA2P23416 452 aa20.83■□□□□ 0.93
GMDS-208ENST00000530927 ARL2P36404 184 aa20.83■□□□□ 0.93
GMDS-208ENST00000530927 ERVK-21P61565 698 aa20.83■□□□□ 0.93
GMDS-208ENST00000530927 CAPSQ13938 189 aa20.83■□□□□ 0.93
GMDS-208ENST00000530927 FAM102BQ5T8I3 360 aa20.83■□□□□ 0.93
GMDS-208ENST00000530927 MAFAQ8NHW3 353 aaPredicted RBP20.83■□□□□ 0.93
GMDS-208ENST00000530927 BHMT2Q9H2M3 363 aa20.83■□□□□ 0.93
GMDS-208ENST00000530927 TSHZ2Q9NRE2 1034 aa20.83■□□□□ 0.93
GMDS-208ENST00000530927 HCSTQ9UBK5 93 aa20.83■□□□□ 0.93
GMDS-208ENST00000530927 ADGRA3Q8IWK6 1321 aa20.83■□□□□ 0.92
GMDS-208ENST00000530927 LPXNO60711 386 aa20.82■□□□□ 0.92
GMDS-208ENST00000530927 FGFR1P11362 822 aa20.82■□□□□ 0.92
GMDS-208ENST00000530927 XRCC6P12956 609 aaKnown RBP eCLIP20.82■□□□□ 0.924e-6■■■■□ 19.8
GMDS-208ENST00000530927 CEBPZQ03701 1054 aaKnown RBP20.82■□□□□ 0.92
GMDS-208ENST00000530927 GRB10Q13322 594 aa20.82■□□□□ 0.92
GMDS-208ENST00000530927 PADI6Q6TGC4 694 aa20.82■□□□□ 0.92
GMDS-208ENST00000530927 TCP11Q8WWU5 503 aa20.82■□□□□ 0.92
GMDS-208ENST00000530927 PPM1EQ8WY54 764 aa20.82■□□□□ 0.92
GMDS-208ENST00000530927 PNMA5Q96PV4 448 aa20.82■□□□□ 0.92
GMDS-208ENST00000530927 TGS1Q96RS0 853 aaKnown RBP20.82■□□□□ 0.92
GMDS-208ENST00000530927 GAS2L1Q99501 681 aaPredicted RBP20.82■□□□□ 0.92
GMDS-208ENST00000530927 NLRC5Q86WI3 1866 aa20.82■□□□□ 0.92
GMDS-208ENST00000530927 XIRP2A4UGR9 3374 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 ARHGEF35A5YM69 484 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 CCDC85BQ15834 202 aaPredicted RBP20.81■□□□□ 0.92
GMDS-208ENST00000530927 LONRF3Q496Y0 759 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 ODR4Q5SWX8 454 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 KRT79Q5XKE5 535 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 SLC24A5Q71RS6 500 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 CATSPER4Q7RTX7 472 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 EXOC8Q8IYI6 725 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 BSNDQ8WZ55 320 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 RAB34Q9BZG1 259 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 RNF19AQ9NV58 838 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 LRFN2Q9ULH4 789 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 PIN4Q9Y237 131 aaKnown RBP20.81■□□□□ 0.92
GMDS-208ENST00000530927 KIAA1671Q9BY89 1806 aa20.81■□□□□ 0.92
GMDS-208ENST00000530927 GAS2O43903 313 aaKnown RBP20.8■□□□□ 0.92
GMDS-208ENST00000530927 SFPQP23246 707 aaKnown RBP eCLIP20.8■□□□□ 0.921e-6■■□□□ 11.6
GMDS-208ENST00000530927 FAM189BP81408 668 aa20.8■□□□□ 0.92
GMDS-208ENST00000530927 CDC42EP1Q00587 391 aa20.8■□□□□ 0.92
GMDS-208ENST00000530927 PKP1Q13835 747 aa20.8■□□□□ 0.92
GMDS-208ENST00000530927 BTG3Q14201 252 aaPredicted RBP20.8■□□□□ 0.92
GMDS-208ENST00000530927 PTPAQ15257 358 aa20.8■□□□□ 0.92
GMDS-208ENST00000530927 ZNF710Q8N1W2 664 aa20.8■□□□□ 0.92
GMDS-208ENST00000530927 MICALL1Q8N3F8 863 aa20.8■□□□□ 0.92
GMDS-208ENST00000530927 RNF169Q8NCN4 708 aa20.8■□□□□ 0.92
GMDS-208ENST00000530927 LRRC15Q8TF66 581 aa20.8■□□□□ 0.92
GMDS-208ENST00000530927 C1orf112Q9NSG2 853 aa20.8■□□□□ 0.92
GMDS-208ENST00000530927 PCDHB7Q9Y5E2 793 aa20.8■□□□□ 0.92
GMDS-208ENST00000530927 MRPL42Q9Y6G3 142 aaKnown RBP20.8■□□□□ 0.92
GMDS-208ENST00000530927 HSP90AA1P07900 732 aaKnown RBP20.79■□□□□ 0.92
GMDS-208ENST00000530927 ZSCAN20P17040 1043 aaPredicted RBP20.79■□□□□ 0.92
GMDS-208ENST00000530927 ATF7P17544 494 aaPredicted RBP20.79■□□□□ 0.92
GMDS-208ENST00000530927 MARCKSP29966 332 aaPredicted RBP20.79■□□□□ 0.92
GMDS-208ENST00000530927 EPC2Q52LR7 807 aa20.79■□□□□ 0.92
GMDS-208ENST00000530927 SPECC1Q5M775 1068 aa20.79■□□□□ 0.92
GMDS-208ENST00000530927 ARL6IP4Q66PJ3 421 aaKnown RBP20.79■□□□□ 0.92
GMDS-208ENST00000530927 ECHDC2Q86YB7 292 aa20.79■□□□□ 0.92
GMDS-208ENST00000530927 FIBCD1Q8N539 461 aa20.79■□□□□ 0.92
GMDS-208ENST00000530927 USP28Q96RU2 1077 aa20.79■□□□□ 0.92
GMDS-208ENST00000530927 SPTBN5Q9NRC6 3674 aaKnown RBP20.79■□□□□ 0.92
GMDS-208ENST00000530927 FNDC1Q4ZHG4 1894 aaPredicted RBP20.79■□□□□ 0.92
GMDS-208ENST00000530927 STAG3L1P0CL83 205 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 CYP11B2P19099 503 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 PTENP60484 403 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 FOXD4L6Q3SYB3 417 aaPredicted RBP20.78■□□□□ 0.92
GMDS-208ENST00000530927 FOXD4L3Q6VB84 417 aaPredicted RBP20.78■□□□□ 0.92
GMDS-208ENST00000530927 TMEM192Q8IY95 271 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 FBXO22Q8NEZ5 403 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 PRDM6Q9NQX0 595 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 MYH15Q9Y2K3 1946 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 TBKBP1A7MCY6 615 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 MEIS3P2A8K0S8 358 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 MUTP22033 750 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 PHKA2P46019 1235 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 MBTD1Q05BQ5 628 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 MXD4Q14582 209 aaPredicted RBP20.78■□□□□ 0.92
GMDS-208ENST00000530927 TWF2Q6IBS0 349 aaKnown RBP20.78■□□□□ 0.92
GMDS-208ENST00000530927 USP49Q70CQ1 688 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 SRGAP1Q7Z6B7 1085 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 LPPQ93052 612 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 CPB2Q96IY4 423 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 KIFC3Q9BVG8 833 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 RUSC1Q9BVN2 902 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 INO80BQ9C086 356 aaPredicted RBP20.78■□□□□ 0.92
GMDS-208ENST00000530927 AGPAT5Q9NUQ2 364 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 TMEM161AQ9NX61 479 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 USP20Q9Y2K6 914 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 MTCH2Q9Y6C9 303 aa20.78■□□□□ 0.92
GMDS-208ENST00000530927 LRRIQ4A6NIV6 560 aa20.77■□□□□ 0.91
GMDS-208ENST00000530927 INO80B-WBP1J3KQ70 363 aa20.77■□□□□ 0.91
GMDS-208ENST00000530927 ASAP2O43150 1006 aa20.77■□□□□ 0.91
GMDS-208ENST00000530927 CSPG5O95196 566 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms