RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 LMCD1Q9NZU5 365 aa19■□□□□ 0.63
CCS-205ENST00000530384 CDH23Q9H251 3354 aa19■□□□□ 0.63
CCS-205ENST00000530384 CHD9Q3L8U1 2897 aa18.99■□□□□ 0.63
CCS-205ENST00000530384 PRRC2BQ5JSZ5 2229 aaKnown RBP18.99■□□□□ 0.63
CCS-205ENST00000530384 LPXNO60711 386 aa18.99■□□□□ 0.63
CCS-205ENST00000530384 CSDE1O75534 798 aaKnown RBP18.99■□□□□ 0.63
CCS-205ENST00000530384 IBSPP21815 317 aaPredicted RBP18.99■□□□□ 0.63
CCS-205ENST00000530384 FGFR4P22455 802 aa18.99■□□□□ 0.63
CCS-205ENST00000530384 TFDP1Q14186 410 aa18.99■□□□□ 0.63
CCS-205ENST00000530384 EPC2Q52LR7 807 aa18.99■□□□□ 0.63
CCS-205ENST00000530384 KRT79Q5XKE5 535 aa18.99■□□□□ 0.63
CCS-205ENST00000530384 ARL6IP4Q66PJ3 421 aaKnown RBP18.99■□□□□ 0.63
CCS-205ENST00000530384 CATSPER4Q7RTX7 472 aa18.99■□□□□ 0.63
CCS-205ENST00000530384 RNF149Q8NC42 400 aa18.99■□□□□ 0.63
CCS-205ENST00000530384 SLC17A8Q8NDX2 589 aa18.99■□□□□ 0.63
CCS-205ENST00000530384 SNX29Q8TEQ0 813 aa18.99■□□□□ 0.63
CCS-205ENST00000530384 GDPD5Q8WTR4 605 aa18.99■□□□□ 0.63
CCS-205ENST00000530384 CLP1Q92989 425 aaKnown RBP18.99■□□□□ 0.63
CCS-205ENST00000530384 MTCH2Q9Y6C9 303 aa18.99■□□□□ 0.63
CCS-205ENST00000530384 FNDC1Q4ZHG4 1894 aaPredicted RBP18.99■□□□□ 0.63
CCS-205ENST00000530384 A0A087WWV3 80 aa18.98■□□□□ 0.63
CCS-205ENST00000530384 HOXA2O43364 376 aa18.98■□□□□ 0.63
CCS-205ENST00000530384 USO1O60763 962 aaKnown RBP18.98■□□□□ 0.63
CCS-205ENST00000530384 BMP15O95972 392 aa18.98■□□□□ 0.63
CCS-205ENST00000530384 SRGAP2CP0DJJ0 459 aa18.98■□□□□ 0.63
CCS-205ENST00000530384 PHKA2P46019 1235 aa18.98■□□□□ 0.63
CCS-205ENST00000530384 POU5F1BQ06416 359 aa18.98■□□□□ 0.63
CCS-205ENST00000530384 HSCBQ8IWL3 235 aa18.98■□□□□ 0.63
CCS-205ENST00000530384 MCPH1Q8NEM0 835 aa18.98■□□□□ 0.63
CCS-205ENST00000530384 A0A0U1RQF3 1178 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 ARHGEF35A5YM69 484 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 C5orf67F2Z3F1 127 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 H3BNC9 293 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 RB1P06400 928 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 SYT1P21579 422 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 CTNNB1P35222 781 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 ARL2P36404 184 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 BMPR1AP36894 532 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 PCBP1Q15365 356 aaKnown RBP eCLIP18.97■□□□□ 0.63
CCS-205ENST00000530384 IL17AQ16552 155 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 ECHDC2Q86YB7 292 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 PPM1EQ8WY54 764 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 TRAIPQ9BWF2 469 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 KIAA1024Q9UPX6 916 aa18.97■□□□□ 0.63
CCS-205ENST00000530384 PIN4Q9Y237 131 aaKnown RBP18.97■□□□□ 0.63
CCS-205ENST00000530384 EOMESO95936 686 aa18.96■□□□□ 0.63
CCS-205ENST00000530384 LINC00271P0C7V0 271 aa18.96■□□□□ 0.63
CCS-205ENST00000530384 SKIP12755 728 aa18.96■□□□□ 0.63
CCS-205ENST00000530384 PTENP60484 403 aa18.96■□□□□ 0.63
CCS-205ENST00000530384 GPM6BQ13491 265 aa18.96■□□□□ 0.63
CCS-205ENST00000530384 CCDC85BQ15834 202 aaPredicted RBP18.96■□□□□ 0.63
CCS-205ENST00000530384 PAN2Q504Q3 1202 aaKnown RBP18.96■□□□□ 0.63
CCS-205ENST00000530384 TWF2Q6IBS0 349 aaKnown RBP18.96■□□□□ 0.63
CCS-205ENST00000530384 PADI6Q6TGC4 694 aa18.96■□□□□ 0.63
CCS-205ENST00000530384 IFNLR1Q8IU57 520 aaPredicted RBP18.96■□□□□ 0.63
CCS-205ENST00000530384 MICALL1Q8N3F8 863 aa18.96■□□□□ 0.63
CCS-205ENST00000530384 C11orf84Q9BUA3 381 aaPredicted RBP18.96■□□□□ 0.63
CCS-205ENST00000530384 PLVAPQ9BX97 442 aa18.96■□□□□ 0.63
CCS-205ENST00000530384 POLR3FQ9H1D9 316 aaPredicted RBP18.96■□□□□ 0.63
CCS-205ENST00000530384 DDX19AQ9NUU7 478 aaKnown RBP18.96■□□□□ 0.63
CCS-205ENST00000530384 MRPL42Q9Y6G3 142 aaKnown RBP18.96■□□□□ 0.63
CCS-205ENST00000530384 CHD7Q9P2D1 2997 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 TBKBP1A7MCY6 615 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 GATMP50440 423 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 RAB27AP51159 221 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 CAPSQ13938 189 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 ECM1Q16610 540 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 PTPROQ16827 1216 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 FAM102BQ5T8I3 360 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.95■□□□□ 0.62
CCS-205ENST00000530384 ASAP3Q8TDY4 903 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 NFKBIZQ9BYH8 718 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 TMEM117Q9H0C3 514 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 BHMT2Q9H2M3 363 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 MINDY3Q9H8M7 445 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 AGPAT5Q9NUQ2 364 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 KIAA1671Q9BY89 1806 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 EYSQ5T1H1 3165 aa18.95■□□□□ 0.62
CCS-205ENST00000530384 VWA3AA6NCI4 1184 aa18.94■□□□□ 0.62
CCS-205ENST00000530384 PP2D1A8MPX8 630 aa18.94■□□□□ 0.62
CCS-205ENST00000530384 ERLIN2O94905 339 aa18.94■□□□□ 0.62
CCS-205ENST00000530384 FGFR1P11362 822 aa18.94■□□□□ 0.62
CCS-205ENST00000530384 CYP11B2P19099 503 aa18.94■□□□□ 0.62
CCS-205ENST00000530384 GLRA2P23416 452 aa18.94■□□□□ 0.62
CCS-205ENST00000530384 NAALADL2Q58DX5 795 aa18.94■□□□□ 0.62
CCS-205ENST00000530384 MAEAQ7L5Y9 396 aa18.94■□□□□ 0.62
CCS-205ENST00000530384 ABI1Q8IZP0 508 aa18.94■□□□□ 0.62
CCS-205ENST00000530384 KCTD17Q8N5Z5 321 aa18.94■□□□□ 0.62
CCS-205ENST00000530384 DNM3Q9UQ16 869 aa18.94■□□□□ 0.62
CCS-205ENST00000530384 EYA4O95677 639 aa18.93■□□□□ 0.62
CCS-205ENST00000530384 CDC25AP30304 524 aa18.93■□□□□ 0.62
CCS-205ENST00000530384 AXLP30530 894 aa18.93■□□□□ 0.62
CCS-205ENST00000530384 NCBP1Q09161 790 aaKnown RBP18.93■□□□□ 0.62
CCS-205ENST00000530384 ZNF598Q86UK7 904 aaKnown RBP18.93■□□□□ 0.62
CCS-205ENST00000530384 RNF169Q8NCN4 708 aa18.93■□□□□ 0.62
CCS-205ENST00000530384 RSPH1Q8WYR4 309 aa18.93■□□□□ 0.62
CCS-205ENST00000530384 P2RX5Q93086 422 aa18.93■□□□□ 0.62
CCS-205ENST00000530384 MRPL38Q96DV4 380 aaKnown RBP18.93■□□□□ 0.62
CCS-205ENST00000530384 AK8Q96MA6 479 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms