RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 NR1I3Q14994 352 aa15.87■□□□□ 0.13
TTC39A-216ENST00000530004 NBPF20Q3BBV1 942 aa15.87■□□□□ 0.13
TTC39A-216ENST00000530004 FILIP1LQ4L180 1135 aa15.87■□□□□ 0.13
TTC39A-216ENST00000530004 ZCWPW2Q504Y3 356 aa15.87■□□□□ 0.13
TTC39A-216ENST00000530004 FOXR2Q6PJQ5 311 aa15.87■□□□□ 0.13
TTC39A-216ENST00000530004 EPM2AIP1Q7L775 607 aaPredicted RBP15.87■□□□□ 0.13
TTC39A-216ENST00000530004 DAW1Q8N136 415 aa15.87■□□□□ 0.13
TTC39A-216ENST00000530004 VTI1AQ96AJ9 217 aa15.87■□□□□ 0.13
TTC39A-216ENST00000530004 STARD7Q9NQZ5 370 aa15.87■□□□□ 0.13
TTC39A-216ENST00000530004 CYP26B1Q9NR63 512 aa15.87■□□□□ 0.13
TTC39A-216ENST00000530004 GRIN2DO15399 1336 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 SMIM10L2AP0DMW4 78 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 SMIM10L2BP0DMW5 78 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 EEF1GP26641 437 aaKnown RBP15.86■□□□□ 0.13
TTC39A-216ENST00000530004 ITGA7Q13683 1181 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 TARBP2Q15633 366 aaKnown RBP15.86■□□□□ 0.13
TTC39A-216ENST00000530004 PTPN21Q16825 1174 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 MTERF2Q49AM1 385 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 ODR4Q5SWX8 454 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 FAM114A1Q8IWE2 563 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 FAM178BQ8IXR5 827 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 PPP1R13LQ8WUF5 828 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 CEP170P1Q96L14 293 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 ZNF830Q96NB3 372 aaPredicted RBP15.86■□□□□ 0.13
TTC39A-216ENST00000530004 TIPINQ9BVW5 301 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 KCTD10Q9H3F6 313 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 TAB2Q9NYJ8 693 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 NRCAMQ92823 1304 aa15.86■□□□□ 0.13
TTC39A-216ENST00000530004 LRRC10BA6NIK2 292 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 ZBTB42B2RXF5 422 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 PRPF6O94906 941 aaKnown RBP15.85■□□□□ 0.13
TTC39A-216ENST00000530004 FGFR1OPO95684 399 aaKnown RBP15.85■□□□□ 0.13
TTC39A-216ENST00000530004 COPB1P53618 953 aaKnown RBP15.85■□□□□ 0.13
TTC39A-216ENST00000530004 PPFIA1Q13136 1202 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 BMT2Q1RMZ1 405 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 VSTM4Q8IW00 320 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 C7orf31Q8N865 590 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 DIS3LQ8TF46 1054 aaKnown RBP15.85■□□□□ 0.13
TTC39A-216ENST00000530004 ABHD8Q96I13 439 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 CNOT6LQ96LI5 555 aaKnown RBP15.85■□□□□ 0.13
TTC39A-216ENST00000530004 CEP89Q96ST8 783 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 VPS16Q9H269 839 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 IMPACTQ9P2X3 320 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 HDAC6Q9UBN7 1215 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
TTC39A-216ENST00000530004 KIAA0100Q14667 2235 aaKnown RBP15.85■□□□□ 0.13
TTC39A-216ENST00000530004 COL6A1P12109 1028 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 NMT1P30419 496 aaKnown RBP15.85■□□□□ 0.13
TTC39A-216ENST00000530004 GRIK4Q16099 956 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 KNOP1Q1ED39 458 aaKnown RBP15.85■□□□□ 0.13
TTC39A-216ENST00000530004 ZNF484Q5JVG2 852 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 NFRKBQ6P4R8 1299 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 SESTD1Q86VW0 696 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 ZNF507Q8TCN5 953 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 TRAPPC12Q8WVT3 735 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 FIZ1Q96SL8 496 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 SENP6Q9GZR1 1112 aaPredicted RBP15.85■□□□□ 0.13
TTC39A-216ENST00000530004 RTN4Q9NQC3 1192 aaKnown RBP15.85■□□□□ 0.13
TTC39A-216ENST00000530004 SETD4Q9NVD3 440 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 PPME1Q9Y570 386 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 COL1A2P08123 1366 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 SCN10AQ9Y5Y9 1956 aa15.85■□□□□ 0.13
TTC39A-216ENST00000530004 A0A0U1RQG5 324 aaPredicted RBP15.84■□□□□ 0.13
TTC39A-216ENST00000530004 RRN3P2A6NIE6 340 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 N4BP3O15049 544 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 EIF3DO15371 548 aaKnown RBP eCLIP15.84■□□□□ 0.13
TTC39A-216ENST00000530004 TEX33O43247 280 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 HOXC8P31273 242 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 HOXD13P35453 343 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 IGBP1P78318 339 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 FAM47CQ5HY64 1035 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 FAM102BQ5T8I3 360 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 LRRC55Q6ZSA7 311 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 ZSCAN30Q86W11 494 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 SLC43A3Q8NBI5 491 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 LMBR1Q8WVP7 490 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 DRC1Q96MC2 740 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 GPRC5CQ9NQ84 441 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 LARSQ9P2J5 1176 aaKnown RBP15.84■□□□□ 0.13
TTC39A-216ENST00000530004 GTF2IRD1Q9UHL9 959 aa15.84■□□□□ 0.13
TTC39A-216ENST00000530004 MYH9P35579 1960 aaKnown RBP15.84■□□□□ 0.13
TTC39A-216ENST00000530004 C17orf102A2RUQ5 167 aa15.83■□□□□ 0.12
TTC39A-216ENST00000530004 PLS3P13797 630 aa15.83■□□□□ 0.12
TTC39A-216ENST00000530004 EN2P19622 333 aaPredicted RBP15.83■□□□□ 0.12
TTC39A-216ENST00000530004 ADAM17P78536 824 aa15.83■□□□□ 0.12
TTC39A-216ENST00000530004 FKBP3Q00688 224 aaKnown RBP15.83■□□□□ 0.12
TTC39A-216ENST00000530004 HIC1Q14526 733 aa15.83■□□□□ 0.12
TTC39A-216ENST00000530004 ZC2HC1CQ53FD0 456 aaPredicted RBP15.83■□□□□ 0.12
TTC39A-216ENST00000530004 MARCH8Q5T0T0 291 aa15.83■□□□□ 0.12
TTC39A-216ENST00000530004 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
TTC39A-216ENST00000530004 ZNF720Q7Z2F6 126 aa15.83■□□□□ 0.12
TTC39A-216ENST00000530004 PAWRQ96IZ0 340 aaKnown RBP15.83■□□□□ 0.12
TTC39A-216ENST00000530004 KCNF1Q9H3M0 494 aa15.83■□□□□ 0.12
TTC39A-216ENST00000530004 DHX33Q9H6R0 707 aaKnown RBP15.83■□□□□ 0.12
TTC39A-216ENST00000530004 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.83■□□□□ 0.12
TTC39A-216ENST00000530004 ZKSCAN5Q9Y2L8 839 aa15.83■□□□□ 0.12
TTC39A-216ENST00000530004 WDR81Q562E7 1941 aa15.83■□□□□ 0.12
TTC39A-216ENST00000530004 ESPNB1AK53 854 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 ARVCFO00192 962 aa15.82■□□□□ 0.12
TTC39A-216ENST00000530004 DGAT1O75907 488 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms