RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 IGLV3-22A0A075B6J6 115 aa21.51■■□□□ 1.03
SSRP1-204ENST00000529002 B4GALT3O60512 393 aa21.51■■□□□ 1.03
SSRP1-204ENST00000529002 SSBP05455 408 aaKnown RBP eCLIP21.51■■□□□ 1.03
SSRP1-204ENST00000529002 ADCY7P51828 1080 aa21.51■■□□□ 1.03
SSRP1-204ENST00000529002 OTOP3Q7RTS5 596 aa21.51■■□□□ 1.03
SSRP1-204ENST00000529002 DDX53Q86TM3 631 aaKnown RBP21.51■■□□□ 1.03
SSRP1-204ENST00000529002 RUFY2Q8WXA3 655 aa21.51■■□□□ 1.03
SSRP1-204ENST00000529002 MAP4K1Q92918 833 aa21.51■■□□□ 1.03
SSRP1-204ENST00000529002 IGSF21Q96ID5 467 aa21.51■■□□□ 1.03
SSRP1-204ENST00000529002 MAP7D2Q96T17 732 aa21.51■■□□□ 1.03
SSRP1-204ENST00000529002 NRDE2Q9H7Z3 1164 aa21.51■■□□□ 1.03
SSRP1-204ENST00000529002 SLC12A7Q9Y666 1083 aa21.51■■□□□ 1.03
SSRP1-204ENST00000529002 SMCO2A6NFE2 343 aa21.5■■□□□ 1.03
SSRP1-204ENST00000529002 SPDYE4A6NLX3 237 aa21.5■■□□□ 1.03
SSRP1-204ENST00000529002 IPO5O00410 1097 aaKnown RBP21.5■■□□□ 1.03
SSRP1-204ENST00000529002 SGSM2O43147 1006 aa21.5■■□□□ 1.03
SSRP1-204ENST00000529002 FOSP01100 380 aaPredicted RBP21.5■■□□□ 1.03
SSRP1-204ENST00000529002 MYBP10242 640 aa21.5■■□□□ 1.03
SSRP1-204ENST00000529002 DARSP14868 501 aaKnown RBP21.5■■□□□ 1.03
SSRP1-204ENST00000529002 GPC3P51654 580 aa21.5■■□□□ 1.03
SSRP1-204ENST00000529002 BMS1Q14692 1282 aaKnown RBP21.5■■□□□ 1.03
SSRP1-204ENST00000529002 PTPN14Q15678 1187 aa21.5■■□□□ 1.03
SSRP1-204ENST00000529002 JAKMIP3Q5VZ66 844 aa21.5■■□□□ 1.03
SSRP1-204ENST00000529002 SFXN1Q9H9B4 322 aa21.5■■□□□ 1.03
SSRP1-204ENST00000529002 DNAJB4Q9UDY4 337 aa21.5■■□□□ 1.03
SSRP1-204ENST00000529002 CA14Q9ULX7 337 aa21.5■■□□□ 1.03
SSRP1-204ENST00000529002 INPP5FQ9Y2H2 1132 aa21.5■■□□□ 1.03
SSRP1-204ENST00000529002 IRAK3Q9Y616 596 aa21.5■■□□□ 1.03
SSRP1-204ENST00000529002 GALTP07902 379 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 CALM1P0DP23 149 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 CALM2P0DP24 149 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 CALM3P0DP25 149 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 MCM5P33992 734 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 CLK2P49760 499 aaKnown RBP21.49■■□□□ 1.03
SSRP1-204ENST00000529002 DRP2Q13474 957 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 SPECC1Q5M775 1068 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 TMEM87BQ96K49 555 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 SCLT1Q96NL6 688 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 KLHL5Q96PQ7 755 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 MRPL9Q9BYD2 267 aaKnown RBP21.49■■□□□ 1.03
SSRP1-204ENST00000529002 GBP3Q9H0R5 595 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 TBC1D13Q9NVG8 400 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 GPR179Q6PRD1 2367 aa21.49■■□□□ 1.03
SSRP1-204ENST00000529002 MAGEB2O15479 319 aa21.48■■□□□ 1.03
SSRP1-204ENST00000529002 ZNF862O60290 1169 aa21.48■■□□□ 1.03
SSRP1-204ENST00000529002 LIFRP42702 1097 aa21.48■■□□□ 1.03
SSRP1-204ENST00000529002 NIPA1Q7RTP0 329 aa21.48■■□□□ 1.03
SSRP1-204ENST00000529002 TMTC2Q8N394 836 aa21.48■■□□□ 1.03
SSRP1-204ENST00000529002 ST13P5Q8NFI4 369 aaPredicted RBP21.48■■□□□ 1.03
SSRP1-204ENST00000529002 HINFPQ9BQA5 517 aa21.48■■□□□ 1.03
SSRP1-204ENST00000529002 ZNF577Q9BSK1 485 aa21.48■■□□□ 1.03
SSRP1-204ENST00000529002 DCNP07585 359 aaKnown RBP21.47■■□□□ 1.03
SSRP1-204ENST00000529002 CNPP09543 421 aaKnown RBP21.47■■□□□ 1.03
SSRP1-204ENST00000529002 KLRC2P26717 231 aa21.47■■□□□ 1.03
SSRP1-204ENST00000529002 SLC11A1P49279 550 aa21.47■■□□□ 1.03
SSRP1-204ENST00000529002 CLCN4P51793 760 aa21.47■■□□□ 1.03
SSRP1-204ENST00000529002 POLGP54098 1239 aaPredicted RBP21.47■■□□□ 1.03
SSRP1-204ENST00000529002 LETM2Q2VYF4 491 aa21.47■■□□□ 1.03
SSRP1-204ENST00000529002 MTA3Q9BTC8 594 aa21.47■■□□□ 1.03
SSRP1-204ENST00000529002 V9GY48 417 aaPredicted RBP21.47■■□□□ 1.03
SSRP1-204ENST00000529002 COL4A3Q01955 1670 aa21.47■■□□□ 1.03
SSRP1-204ENST00000529002 PSAPP07602 524 aa21.46■■□□□ 1.03
SSRP1-204ENST00000529002 PHKA2P46019 1235 aa21.46■■□□□ 1.03
SSRP1-204ENST00000529002 FUT2Q10981 343 aa21.46■■□□□ 1.03
SSRP1-204ENST00000529002 ZNF746Q6NUN9 644 aaPredicted RBP21.46■■□□□ 1.03
SSRP1-204ENST00000529002 ZNF280BQ86YH2 543 aa21.46■■□□□ 1.03
SSRP1-204ENST00000529002 EXOC6Q8TAG9 804 aa21.46■■□□□ 1.03
SSRP1-204ENST00000529002 NLRP7Q8WX94 980 aa21.46■■□□□ 1.03
SSRP1-204ENST00000529002 CRYGNQ8WXF5 182 aa21.46■■□□□ 1.03
SSRP1-204ENST00000529002 CNTNAP3BQ96NU0 1288 aa21.46■■□□□ 1.03
SSRP1-204ENST00000529002 CNTNAP3Q9BZ76 1288 aa21.46■■□□□ 1.03
SSRP1-204ENST00000529002 TBC1D17Q9HA65 648 aa21.46■■□□□ 1.03
SSRP1-204ENST00000529002 CEP131Q9UPN4 1083 aa21.46■■□□□ 1.03
SSRP1-204ENST00000529002 PCDHA10Q9Y5I2 948 aa21.46■■□□□ 1.03
SSRP1-204ENST00000529002 EPG5Q9HCE0 2579 aa21.45■■□□□ 1.03
SSRP1-204ENST00000529002 MIA3Q5JRA6 1907 aa21.45■■□□□ 1.02
SSRP1-204ENST00000529002 MTCL1Q9Y4B5 1905 aaKnown RBP21.45■■□□□ 1.02
SSRP1-204ENST00000529002 RFX1P22670 979 aa21.45■■□□□ 1.02
SSRP1-204ENST00000529002 TMOD1P28289 359 aa21.45■■□□□ 1.02
SSRP1-204ENST00000529002 GBP2P32456 591 aaPredicted RBP21.45■■□□□ 1.02
SSRP1-204ENST00000529002 AP3B2Q13367 1082 aa21.45■■□□□ 1.02
SSRP1-204ENST00000529002 GIT2Q14161 759 aa21.45■■□□□ 1.02
SSRP1-204ENST00000529002 PUM1Q14671 1186 aaKnown RBP eCLIP21.45■■□□□ 1.02
SSRP1-204ENST00000529002 UGCGQ16739 394 aa21.45■■□□□ 1.02
SSRP1-204ENST00000529002 MYADMQ96S97 322 aa21.45■■□□□ 1.02
SSRP1-204ENST00000529002 DACT1Q9NYF0 836 aa21.45■■□□□ 1.02
SSRP1-204ENST00000529002 IGSF9Q9P2J2 1179 aa21.45■■□□□ 1.02
SSRP1-204ENST00000529002 WNT16Q9UBV4 365 aa21.45■■□□□ 1.02
SSRP1-204ENST00000529002 SAMM50Q9Y512 469 aa21.45■■□□□ 1.02
SSRP1-204ENST00000529002 NOMO2Q5JPE7 1267 aa21.44■■□□□ 1.02
SSRP1-204ENST00000529002 TWF2Q6IBS0 349 aaKnown RBP21.44■■□□□ 1.02
SSRP1-204ENST00000529002 PPP1R18Q6NYC8 613 aa21.44■■□□□ 1.02
SSRP1-204ENST00000529002 PPFIBP1Q86W92 1011 aa21.44■■□□□ 1.02
SSRP1-204ENST00000529002 SH2D3AQ9BRG2 576 aa21.44■■□□□ 1.02
SSRP1-204ENST00000529002 SEMA4AQ9H3S1 761 aa21.44■■□□□ 1.02
SSRP1-204ENST00000529002 MYH15Q9Y2K3 1946 aa21.43■■□□□ 1.02
SSRP1-204ENST00000529002 TMEM150BA6NC51 233 aa21.43■■□□□ 1.02
SSRP1-204ENST00000529002 POTEMA6NI47 508 aa21.43■■□□□ 1.02
SSRP1-204ENST00000529002 C2CD2LO14523 706 aa21.43■■□□□ 1.02
SSRP1-204ENST00000529002 SLC27A2O14975 620 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms