RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 MINDY3Q9H8M7 445 aa18.72■□□□□ 0.59
HIF3A-211ENST00000528563 CHST12Q9NRB3 414 aa18.72■□□□□ 0.59
HIF3A-211ENST00000528563 DDX19AQ9NUU7 478 aaKnown RBP18.72■□□□□ 0.59
HIF3A-211ENST00000528563 CYP11B2P19099 503 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 POU3F3P20264 500 aaPredicted RBP18.71■□□□□ 0.59
HIF3A-211ENST00000528563 FAM173BQ6P4H8 233 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 PADI6Q6TGC4 694 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 RNF149Q8NC42 400 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 ELAC1Q9H777 363 aaKnown RBP18.71■□□□□ 0.59
HIF3A-211ENST00000528563 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
HIF3A-211ENST00000528563 PCDHB7Q9Y5E2 793 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 ARHGEF35A5YM69 484 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 LPXNO60711 386 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 USO1O60763 962 aaKnown RBP18.71■□□□□ 0.59
HIF3A-211ENST00000528563 LINC00271P0C7V0 271 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 SFPQP23246 707 aaKnown RBP eCLIP18.71■□□□□ 0.59
HIF3A-211ENST00000528563 GLRA2P23416 452 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 PTENP60484 403 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 PTPAQ15257 358 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 HYIQ5T013 277 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 IFNLR1Q8IU57 520 aaPredicted RBP18.71■□□□□ 0.59
HIF3A-211ENST00000528563 MCPH1Q8NEM0 835 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 ASAP3Q8TDY4 903 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 C17orf80Q9BSJ5 609 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 TRAIPQ9BWF2 469 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 BHMT2Q9H2M3 363 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 ZSCAN16Q9H4T2 348 aaPredicted RBP18.71■□□□□ 0.59
HIF3A-211ENST00000528563 LRFN2Q9ULH4 789 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 DNM3Q9UQ16 869 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 CLIC4Q9Y696 253 aa18.71■□□□□ 0.59
HIF3A-211ENST00000528563 COL6A3P12111 3177 aa18.7■□□□□ 0.58
HIF3A-211ENST00000528563 COL4A6Q14031 1691 aa18.7■□□□□ 0.58
HIF3A-211ENST00000528563 A0A0U1RQF3 1178 aa18.7■□□□□ 0.58
HIF3A-211ENST00000528563 PDIA4P13667 645 aaKnown RBP18.7■□□□□ 0.58
HIF3A-211ENST00000528563 CATSPER4Q7RTX7 472 aa18.7■□□□□ 0.58
HIF3A-211ENST00000528563 FIBCD1Q8N539 461 aa18.7■□□□□ 0.58
HIF3A-211ENST00000528563 KCTD17Q8N5Z5 321 aa18.7■□□□□ 0.58
HIF3A-211ENST00000528563 AK8Q96MA6 479 aa18.7■□□□□ 0.58
HIF3A-211ENST00000528563 POLR3FQ9H1D9 316 aaPredicted RBP18.7■□□□□ 0.58
HIF3A-211ENST00000528563 GPRC5CQ9NQ84 441 aa18.7■□□□□ 0.58
HIF3A-211ENST00000528563 TMEM161AQ9NX61 479 aa18.7■□□□□ 0.58
HIF3A-211ENST00000528563 DACT1Q9NYF0 836 aa18.7■□□□□ 0.58
HIF3A-211ENST00000528563 MTUS1Q9ULD2 1270 aa18.7■□□□□ 0.58
HIF3A-211ENST00000528563 ADGRA3Q8IWK6 1321 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 E9PMD0 336 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 EYA4O95677 639 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 HSP90AA1P07900 732 aaKnown RBP18.69■□□□□ 0.58
HIF3A-211ENST00000528563 HOXA11P31270 313 aaPredicted RBP18.69■□□□□ 0.58
HIF3A-211ENST00000528563 PHKA2P46019 1235 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 CAPSQ13938 189 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 TFDP1Q14186 410 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 BTG3Q14201 252 aaPredicted RBP18.69■□□□□ 0.58
HIF3A-211ENST00000528563 EPC2Q52LR7 807 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 FAM102BQ5T8I3 360 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 MAEAQ7L5Y9 396 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 KCNK18Q7Z418 384 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 ECHDC2Q86YB7 292 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 CMTR2Q8IYT2 770 aaKnown RBP18.69■□□□□ 0.58
HIF3A-211ENST00000528563 MAFAQ8NHW3 353 aaPredicted RBP18.69■□□□□ 0.58
HIF3A-211ENST00000528563 CLP1Q92989 425 aaKnown RBP18.69■□□□□ 0.58
HIF3A-211ENST00000528563 SAMD11Q96NU1 681 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 PNMA5Q96PV4 448 aa18.69■□□□□ 0.58
HIF3A-211ENST00000528563 PRRC2BQ5JSZ5 2229 aaKnown RBP18.68■□□□□ 0.58
HIF3A-211ENST00000528563 IGFBP4P22692 258 aa18.68■□□□□ 0.58
HIF3A-211ENST00000528563 GATMP50440 423 aa18.68■□□□□ 0.58
HIF3A-211ENST00000528563 GRIN1Q05586 938 aa18.68■□□□□ 0.58
HIF3A-211ENST00000528563 GRB10Q13322 594 aa18.68■□□□□ 0.58
HIF3A-211ENST00000528563 PCBP1Q15365 356 aaKnown RBP eCLIP18.68■□□□□ 0.58
HIF3A-211ENST00000528563 ZNF598Q86UK7 904 aaKnown RBP18.68■□□□□ 0.58
HIF3A-211ENST00000528563 TMEM192Q8IY95 271 aa18.68■□□□□ 0.58
HIF3A-211ENST00000528563 NFKBIZQ9BYH8 718 aa18.68■□□□□ 0.58
HIF3A-211ENST00000528563 EOMESO95936 686 aa18.67■□□□□ 0.58
HIF3A-211ENST00000528563 LONP1P36776 959 aaKnown RBP18.67■□□□□ 0.58
HIF3A-211ENST00000528563 BMPR1AP36894 532 aa18.67■□□□□ 0.58
HIF3A-211ENST00000528563 FBXO22Q8NEZ5 403 aa18.67■□□□□ 0.58
HIF3A-211ENST00000528563 NT5C3AQ9H0P0 336 aa18.67■□□□□ 0.58
HIF3A-211ENST00000528563 AGPAT5Q9NUQ2 364 aa18.67■□□□□ 0.58
HIF3A-211ENST00000528563 PIN4Q9Y237 131 aaKnown RBP18.67■□□□□ 0.58
HIF3A-211ENST00000528563 MTCH2Q9Y6C9 303 aa18.67■□□□□ 0.58
HIF3A-211ENST00000528563 SLC26A4O43511 780 aa18.66■□□□□ 0.58
HIF3A-211ENST00000528563 ZNF623O75123 536 aa18.66■□□□□ 0.58
HIF3A-211ENST00000528563 FGFR1P11362 822 aa18.66■□□□□ 0.58
HIF3A-211ENST00000528563 IBSPP21815 317 aaPredicted RBP18.66■□□□□ 0.58
HIF3A-211ENST00000528563 SPRYD3Q8NCJ5 442 aa18.66■□□□□ 0.58
HIF3A-211ENST00000528563 USP28Q96RU2 1077 aa18.66■□□□□ 0.58
HIF3A-211ENST00000528563 POLD4Q9HCU8 107 aa18.66■□□□□ 0.58
HIF3A-211ENST00000528563 RNF19AQ9NV58 838 aa18.66■□□□□ 0.58
HIF3A-211ENST00000528563 MRPL42Q9Y6G3 142 aaKnown RBP18.66■□□□□ 0.58
HIF3A-211ENST00000528563 MORC2Q9Y6X9 1032 aaPredicted RBP18.66■□□□□ 0.58
HIF3A-211ENST00000528563 C5orf67F2Z3F1 127 aa18.65■□□□□ 0.58
HIF3A-211ENST00000528563 ATF7P17544 494 aaPredicted RBP18.65■□□□□ 0.58
HIF3A-211ENST00000528563 UBA7P41226 1012 aa18.65■□□□□ 0.58
HIF3A-211ENST00000528563 MBTD1Q05BQ5 628 aa18.65■□□□□ 0.58
HIF3A-211ENST00000528563 SLC39A14Q15043 492 aa18.65■□□□□ 0.58
HIF3A-211ENST00000528563 ZRSR1Q15695 479 aaKnown RBP18.65■□□□□ 0.58
HIF3A-211ENST00000528563 AMHR2Q16671 573 aa18.65■□□□□ 0.58
HIF3A-211ENST00000528563 TMEM119Q4V9L6 283 aa18.65■□□□□ 0.58
HIF3A-211ENST00000528563 TWF2Q6IBS0 349 aaKnown RBP18.65■□□□□ 0.58
HIF3A-211ENST00000528563 RINT1Q6NUQ1 792 aa18.65■□□□□ 0.58
HIF3A-211ENST00000528563 C1orf186Q6ZWK4 172 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms