RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	MTR	Q99707	1265 aa		13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	MINDY3	Q9H8M7	445 aa		13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	ATP6V0A4	Q9HBG4	840 aa		13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	TUFT1	Q9NNX1	390 aa		13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	RNF216	Q9NWF9	866 aa	Predicted RBP	13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	HCST	Q9UBK5	93 aa		13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	TTC3	P53804	2025 aa		13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	COL4A4	P53420	1690 aa	Predicted RBP	13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	GRM6	O15303	877 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	DGAT1	O75907	488 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	SRGAP2C	P0DJJ0	459 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	XRCC6	P12956	609 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	RPA1	P27694	616 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	FXR2	P51116	673 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	TFF2	Q03403	129 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	PTGDR	Q13258	359 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	TJAP1	Q5JTD0	557 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	POTEG	Q6S5H5	508 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	RNF149	Q8NC42	400 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	ASAP3	Q8TDY4	903 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	TCP11	Q8WWU5	503 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	CCDC43	Q96MW1	224 aa	Known RBP	13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	ASB2	Q96Q27	587 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	PLVAP	Q9BX97	442 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	INO80B	Q9C086	356 aa	Predicted RBP	13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	CHST12	Q9NRB3	414 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	PIN4	Q9Y237	131 aa	Known RBP	13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362	MUC3A	Q02505	3323 aa		13.1	□□□□□ -0.31
PSMC3-205	ENST00000528362		H3BQV1	296 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	USO1	O60763	962 aa	Known RBP	13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	ARL2	P36404	184 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	MRPS5	P82675	430 aa	Known RBP	13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	IL17A	Q16552	155 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	ECM1	Q16610	540 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	TIGD5	Q53EQ6	642 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	CLLU1OS	Q5K130	101 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	CATSPER4	Q7RTX7	472 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	SRGAP1	Q7Z6B7	1085 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	RNF169	Q8NCN4	708 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	ERMN	Q8TAM6	284 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	P2RX5	Q93086	422 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	CASD1	Q96PB1	797 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	TRAIP	Q9BWF2	469 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	TMEM117	Q9H0C3	514 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	AGPAT5	Q9NUQ2	364 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	TYW1	Q9NV66	732 aa	Known RBP	13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	DACT1	Q9NYF0	836 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	DBR1	Q9UK59	544 aa	Known RBP	13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	PLAGL2	Q9UPG8	496 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	GTF3C3	Q9Y5Q9	886 aa		13.09	□□□□□ -0.31
PSMC3-205	ENST00000528362	TTC28	Q96AY4	2481 aa		13.08	□□□□□ -0.31
PSMC3-205	ENST00000528362	ASAP2	O43150	1006 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	HOXA2	O43364	376 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	EOMES	O95936	686 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	ITGB1	P05556	798 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	GLRA2	P23416	452 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	DNAJB1	P25685	340 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	HOXA11	P31270	313 aa	Predicted RBP	13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	PRPH	P41219	470 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	PHKA2	P46019	1235 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	PTEN	P60484	403 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	CAPS	Q13938	189 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	CAMK1	Q14012	370 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	MXD4	Q14582	209 aa	Predicted RBP	13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	NAALADL2	Q58DX5	795 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	RILPL1	Q5EBL4	403 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	TCEAL5	Q5H9L2	206 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	LARP1B	Q659C4	914 aa	Known RBP	13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	HAUS3	Q68CZ6	603 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	TWF2	Q6IBS0	349 aa	Known RBP	13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	LRRC55	Q6ZSA7	311 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	IGSF22	Q8N9C0	903 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	KLHL23	Q8NBE8	558 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	HLA-C	Q95604	372 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	NACC1	Q96RE7	527 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	LMAN2L	Q9H0V9	348 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	CWH43	Q9H720	699 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	ALG13	Q9NP73	1137 aa	Known RBP	13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	GPRC5C	Q9NQ84	441 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	LRWD1	Q9UFC0	647 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	COG5	Q9UP83	839 aa		13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	MYH9	P35579	1960 aa	Known RBP	13.08	□□□□□ -0.32
PSMC3-205	ENST00000528362	PP2D1	A8MPX8	630 aa		13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	LAD1	O00515	517 aa		13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	CSPG5	O95196	566 aa		13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	MUT	P22033	750 aa		13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	CCT6A	P40227	531 aa	Known RBP	13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	KCNQ1	P51787	676 aa		13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	ATP2C1	P98194	919 aa	Predicted RBP	13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	PDIA5	Q14554	519 aa		13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	MAEA	Q7L5Y9	396 aa		13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	ABI1	Q8IZP0	508 aa		13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	LRRC43	Q8N309	656 aa		13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	COLGALT1	Q8NBJ5	622 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms