RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 LYPLA2O95372 231 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 VTNP04004 478 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 RBM25P49756 843 aaKnown RBP12.47□□□□□ -0.41
NR1H3-230ENST00000527949 HMGN5P82970 282 aaKnown RBP12.47□□□□□ -0.41
NR1H3-230ENST00000527949 ST3GAL1Q11201 340 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 TRIM29Q14134 588 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 TMEM266Q2M3C6 531 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 C8orf34Q49A92 452 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 PDE12Q6L8Q7 609 aaKnown RBP12.47□□□□□ -0.41
NR1H3-230ENST00000527949 ANO5Q75V66 913 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 GJA10Q969M2 543 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 INO80BQ9C086 356 aaPredicted RBP12.47□□□□□ -0.41
NR1H3-230ENST00000527949 ALG13Q9NP73 1137 aaKnown RBP12.47□□□□□ -0.41
NR1H3-230ENST00000527949 CHST12Q9NRB3 414 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 AAASQ9NRG9 546 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 GJB4Q9NTQ9 266 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 LRFN2Q9ULH4 789 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 AKT3Q9Y243 479 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 PCDHB7Q9Y5E2 793 aa12.47□□□□□ -0.41
NR1H3-230ENST00000527949 RFC5P40937 340 aa12.46□□□□□ -0.41
NR1H3-230ENST00000527949 TCF15Q12870 199 aa12.46□□□□□ -0.41
NR1H3-230ENST00000527949 NR5A1Q13285 461 aa12.46□□□□□ -0.41
NR1H3-230ENST00000527949 EARS2Q5JPH6 523 aaKnown RBP12.46□□□□□ -0.41
NR1H3-230ENST00000527949 DIS3L2Q8IYB7 885 aaKnown RBP12.46□□□□□ -0.41
NR1H3-230ENST00000527949 LRRC71Q8N4P6 559 aa12.46□□□□□ -0.41
NR1H3-230ENST00000527949 SPPL3Q8TCT6 385 aa12.46□□□□□ -0.41
NR1H3-230ENST00000527949 KIF2CQ99661 725 aa12.46□□□□□ -0.41
NR1H3-230ENST00000527949 GCOM2Q9BZD3 368 aaPredicted RBP12.46□□□□□ -0.41
NR1H3-230ENST00000527949 DHX33Q9H6R0 707 aaKnown RBP12.46□□□□□ -0.41
NR1H3-230ENST00000527949 CYP26B1Q9NR63 512 aa12.46□□□□□ -0.41
NR1H3-230ENST00000527949 CLEC1BQ9P126 229 aa12.46□□□□□ -0.41
NR1H3-230ENST00000527949 SEPT9Q9UHD8 586 aaPredicted RBP12.46□□□□□ -0.41
NR1H3-230ENST00000527949 GINS2Q9Y248 185 aa12.46□□□□□ -0.41
NR1H3-230ENST00000527949 MRPL42Q9Y6G3 142 aaKnown RBP12.46□□□□□ -0.41
NR1H3-230ENST00000527949 CARNS1A5YM72 827 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 DDX11L8A8MPP1 907 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 BTBD18B2RXH4 712 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 LINC01565O15544 149 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 JAK2O60674 1132 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 EOMESO95936 686 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 ZSCAN20P17040 1043 aaPredicted RBP12.45□□□□□ -0.42
NR1H3-230ENST00000527949 CAMK1Q14012 370 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 SAFBQ15424 915 aaKnown RBP eCLIP12.45□□□□□ -0.42
NR1H3-230ENST00000527949 MTERF2Q49AM1 385 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 IER5LQ5T953 404 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 OTUD6AQ7L8S5 288 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 POTEDQ86YR6 584 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 POF1BQ8WVV4 589 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 TMEM117Q9H0C3 514 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 ZSWIM4Q9H7M6 989 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 TLE6Q9H808 572 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 ATP6V0A4Q9HBG4 840 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 DACT1Q9NYF0 836 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 USP15Q9Y4E8 981 aaPredicted RBP12.45□□□□□ -0.42
NR1H3-230ENST00000527949 PCDHB12Q9Y5F1 795 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 KIAA1671Q9BY89 1806 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 ATG2AQ2TAZ0 1938 aa12.45□□□□□ -0.42
NR1H3-230ENST00000527949 A0A0U1RQF3 1178 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 ASAP2O43150 1006 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 MARCH6O60337 910 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 ITGB1P05556 798 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 XRCC6P12956 609 aaKnown RBP eCLIP12.44□□□□□ -0.42
NR1H3-230ENST00000527949 SFPQP23246 707 aaKnown RBP eCLIP12.44□□□□□ -0.42
NR1H3-230ENST00000527949 GTF2F1P35269 517 aaKnown RBP eCLIP12.44□□□□□ -0.42
NR1H3-230ENST00000527949 NRIP1P48552 1158 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 POU5F1BQ06416 359 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 PCBP1Q15365 356 aaKnown RBP eCLIP12.44□□□□□ -0.42
NR1H3-230ENST00000527949 TRMT1LQ7Z2T5 733 aaKnown RBP12.44□□□□□ -0.42
NR1H3-230ENST00000527949 ZNF598Q86UK7 904 aaKnown RBP12.44□□□□□ -0.42
NR1H3-230ENST00000527949 KLHL23Q8NBE8 558 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 SLC7A3Q8WY07 619 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 ATOH1Q92858 354 aaPredicted RBP12.44□□□□□ -0.42
NR1H3-230ENST00000527949 MTMR9Q96QG7 549 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 HSD17B14Q9BPX1 270 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 LXNQ9BS40 222 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 FOXP1Q9H334 677 aaPredicted RBP12.44□□□□□ -0.42
NR1H3-230ENST00000527949 SUCLA2Q9P2R7 463 aaPredicted RBP12.44□□□□□ -0.42
NR1H3-230ENST00000527949 DAXXQ9UER7 740 aaPredicted RBP12.44□□□□□ -0.42
NR1H3-230ENST00000527949 PCDHA12Q9UN75 941 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 LZTS1Q9Y250 596 aa12.44□□□□□ -0.42
NR1H3-230ENST00000527949 FAM205CA6NFA0 338 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 PROB1E7EW31 1015 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 NEMFO60524 1076 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 ZNF623O75123 536 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 SKIP12755 728 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 AVPR2P30518 371 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 YWHABP31946 246 aaKnown RBP12.43□□□□□ -0.42
NR1H3-230ENST00000527949 TRAPPC10P48553 1259 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 DRP2Q13474 957 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 RABEP1Q15276 862 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 CALCRLQ16602 461 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 PTPN21Q16825 1174 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 SRGAP1Q7Z6B7 1085 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 ECHDC2Q86YB7 292 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 FBXO18Q8NFZ0 1043 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 MICAL1Q8TDZ2 1067 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 TCP11Q8WWU5 503 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 NLRP7Q8WX94 980 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 C8orf76Q96K31 380 aa12.43□□□□□ -0.42
NR1H3-230ENST00000527949 RPGRIP1Q96KN7 1286 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms