RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 AAK1Q2M2I8 961 aa17.33■□□□□ 0.36
CAPN1-213ENST00000527897 TIGD5Q53EQ6 642 aa17.33■□□□□ 0.36
CAPN1-213ENST00000527897 FAM43BQ6ZT52 329 aaPredicted RBP17.33■□□□□ 0.36
CAPN1-213ENST00000527897 ECHDC2Q86YB7 292 aa17.33■□□□□ 0.36
CAPN1-213ENST00000527897 ABI1Q8IZP0 508 aa17.33■□□□□ 0.36
CAPN1-213ENST00000527897 HSD17B14Q9BPX1 270 aa17.33■□□□□ 0.36
CAPN1-213ENST00000527897 HCSTQ9UBK5 93 aa17.33■□□□□ 0.36
CAPN1-213ENST00000527897 COG5Q9UP83 839 aa17.33■□□□□ 0.36
CAPN1-213ENST00000527897 PIN4Q9Y237 131 aaKnown RBP17.33■□□□□ 0.36
CAPN1-213ENST00000527897 PPME1Q9Y570 386 aa17.33■□□□□ 0.36
CAPN1-213ENST00000527897 CUL9Q8IWT3 2517 aa17.33■□□□□ 0.36
CAPN1-213ENST00000527897 MYO7AQ13402 2215 aa17.32■□□□□ 0.36
CAPN1-213ENST00000527897 H3BQV1 296 aa17.32■□□□□ 0.36
CAPN1-213ENST00000527897 MCM2P49736 904 aa17.32■□□□□ 0.36
CAPN1-213ENST00000527897 KCNQ1P51787 676 aa17.32■□□□□ 0.36
CAPN1-213ENST00000527897 LAMTOR4Q0VGL1 99 aa17.32■□□□□ 0.36
CAPN1-213ENST00000527897 LONRF3Q496Y0 759 aa17.32■□□□□ 0.36
CAPN1-213ENST00000527897 TCEAL5Q5H9L2 206 aa17.32■□□□□ 0.36
CAPN1-213ENST00000527897 TWF2Q6IBS0 349 aaKnown RBP17.32■□□□□ 0.36
CAPN1-213ENST00000527897 TCP11Q8WWU5 503 aa17.32■□□□□ 0.36
CAPN1-213ENST00000527897 PLVAPQ9BX97 442 aa17.32■□□□□ 0.36
CAPN1-213ENST00000527897 ELAC1Q9H777 363 aaKnown RBP17.32■□□□□ 0.36
CAPN1-213ENST00000527897 DACT1Q9NYF0 836 aa17.32■□□□□ 0.36
CAPN1-213ENST00000527897 SMC3Q9UQE7 1217 aa17.32■□□□□ 0.36
CAPN1-213ENST00000527897 GAS2O43903 313 aaKnown RBP17.31■□□□□ 0.36
CAPN1-213ENST00000527897 USO1O60763 962 aaKnown RBP17.31■□□□□ 0.36
CAPN1-213ENST00000527897 TRAPPC10P48553 1259 aa17.31■□□□□ 0.36
CAPN1-213ENST00000527897 FAM189BP81408 668 aa17.31■□□□□ 0.36
CAPN1-213ENST00000527897 MAEAQ7L5Y9 396 aa17.31■□□□□ 0.36
CAPN1-213ENST00000527897 KLHL23Q8NBE8 558 aa17.31■□□□□ 0.36
CAPN1-213ENST00000527897 RNF149Q8NC42 400 aa17.31■□□□□ 0.36
CAPN1-213ENST00000527897 ERMNQ8TAM6 284 aa17.31■□□□□ 0.36
CAPN1-213ENST00000527897 NSUN3Q9H649 340 aaKnown RBP17.31■□□□□ 0.36
CAPN1-213ENST00000527897 ANKEF1Q9NU02 776 aa17.31■□□□□ 0.36
CAPN1-213ENST00000527897 TYW1Q9NV66 732 aaKnown RBP17.31■□□□□ 0.36
CAPN1-213ENST00000527897 PLAGL2Q9UPG8 496 aa17.31■□□□□ 0.36
CAPN1-213ENST00000527897 PCDHB12Q9Y5F1 795 aa17.31■□□□□ 0.36
CAPN1-213ENST00000527897 ATG2AQ2TAZ0 1938 aa17.31■□□□□ 0.36
CAPN1-213ENST00000527897 HOXA2O43364 376 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 MED24O75448 989 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 LYPLA2O95372 231 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 ITGB1P05556 798 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 U2AF2P26368 475 aaKnown RBP eCLIP17.3■□□□□ 0.36
CAPN1-213ENST00000527897 RARRES1P49788 294 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 ORC2Q13416 577 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-213ENST00000527897 POTEGQ6S5H5 508 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 FERMT3Q86UX7 667 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 CATSPER3Q86XQ3 398 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 HELQQ8TDG4 1101 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 ADAMTS19Q8TE59 1207 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 TMEM117Q9H0C3 514 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 UBE2ZQ9H832 354 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-213ENST00000527897 IFT122Q9HBG6 1241 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 XPNPEP1Q9NQW7 623 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 AAASQ9NRG9 546 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 PCDHB6Q9Y5E3 794 aa17.3■□□□□ 0.36
CAPN1-213ENST00000527897 PLXNA4Q9HCM2 1894 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 BRWD1Q9NSI6 2320 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 A0A0U1RQF3 1178 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 DGAT1O75907 488 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 SPATA31C1P0DKV0 1188 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 KCNA5P22460 613 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 PHKA2P46019 1235 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 TOB1P50616 345 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-213ENST00000527897 PTGDRQ13258 359 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 THNSL1Q8IYQ7 743 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 POF1BQ8WVV4 589 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 LPPQ93052 612 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 P2RX5Q93086 422 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 CASD1Q96PB1 797 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 LMAN2LQ9H0V9 348 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 IGFLR1Q9H665 355 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 MINDY3Q9H8M7 445 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 TUFT1Q9NNX1 390 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 CHST12Q9NRB3 414 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 RNF19AQ9NV58 838 aa17.29■□□□□ 0.36
CAPN1-213ENST00000527897 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-213ENST00000527897 ASAP2O43150 1006 aa17.28■□□□□ 0.36
CAPN1-213ENST00000527897 ERLIN2O94905 339 aa17.28■□□□□ 0.36
CAPN1-213ENST00000527897 CCT6AP40227 531 aaKnown RBP17.28■□□□□ 0.36
CAPN1-213ENST00000527897 TFDP1Q14186 410 aa17.28■□□□□ 0.36
CAPN1-213ENST00000527897 MXD4Q14582 209 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-213ENST00000527897 CLLU1OSQ5K130 101 aa17.28■□□□□ 0.36
CAPN1-213ENST00000527897 SRGAP1Q7Z6B7 1085 aa17.28■□□□□ 0.36
CAPN1-213ENST00000527897 COLGALT1Q8NBJ5 622 aa17.28■□□□□ 0.36
CAPN1-213ENST00000527897 SPPL3Q8TCT6 385 aa17.28■□□□□ 0.36
CAPN1-213ENST00000527897 ASAP3Q8TDY4 903 aa17.28■□□□□ 0.36
CAPN1-213ENST00000527897 NECAB3Q96P71 396 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-213ENST00000527897 UHRF1Q96T88 793 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-213ENST00000527897 POLR3CQ9BUI4 534 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-213ENST00000527897 POLR3FQ9H1D9 316 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-213ENST00000527897 INO80B-WBP1J3KQ70 363 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 EOMESO95936 686 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 ATF7P17544 494 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-213ENST00000527897 LAG3P18627 525 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 DNAJB1P25685 340 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 PBX3P40426 434 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 NAALADL2Q58DX5 795 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 HAUS3Q68CZ6 603 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 LRRC55Q6ZSA7 311 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms