RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 ATP6V0A4Q9HBG4 840 aa29.37■■■□□ 2.29
TSPAN4-217ENST00000527644 IFT122Q9HBG6 1241 aa29.37■■■□□ 2.29
TSPAN4-217ENST00000527644 XPNPEP1Q9NQW7 623 aa29.37■■■□□ 2.29
TSPAN4-217ENST00000527644 DACT1Q9NYF0 836 aa29.37■■■□□ 2.29
TSPAN4-217ENST00000527644 UNC80Q8N2C7 3258 aa29.37■■■□□ 2.29
TSPAN4-217ENST00000527644 RALGAPA2Q2PPJ7 1873 aa29.36■■■□□ 2.29
TSPAN4-217ENST00000527644 MUTP22033 750 aa29.36■■■□□ 2.29
TSPAN4-217ENST00000527644 CTNNB1P35222 781 aa29.36■■■□□ 2.29
TSPAN4-217ENST00000527644 GPM6BQ13491 265 aa29.36■■■□□ 2.29
TSPAN4-217ENST00000527644 FERMT3Q86UX7 667 aa29.36■■■□□ 2.29
TSPAN4-217ENST00000527644 RAB34Q9BZG1 259 aa29.36■■■□□ 2.29
TSPAN4-217ENST00000527644 LRWD1Q9UFC0 647 aa29.36■■■□□ 2.29
TSPAN4-217ENST00000527644 DBR1Q9UK59 544 aaKnown RBP29.36■■■□□ 2.29
TSPAN4-217ENST00000527644 STK24Q9Y6E0 443 aa29.36■■■□□ 2.29
TSPAN4-217ENST00000527644 MRPL42Q9Y6G3 142 aaKnown RBP29.36■■■□□ 2.29
TSPAN4-217ENST00000527644 NLRC5Q86WI3 1866 aa29.36■■■□□ 2.29
TSPAN4-217ENST00000527644 A0A087WWV3 80 aa29.35■■■□□ 2.29
TSPAN4-217ENST00000527644 SRGAP2CP0DJJ0 459 aa29.35■■■□□ 2.29
TSPAN4-217ENST00000527644 PRPHP41219 470 aa29.35■■■□□ 2.29
TSPAN4-217ENST00000527644 MXD4Q14582 209 aaPredicted RBP29.35■■■□□ 2.29
TSPAN4-217ENST00000527644 PAN2Q504Q3 1202 aaKnown RBP29.35■■■□□ 2.29
TSPAN4-217ENST00000527644 SRGAP1Q7Z6B7 1085 aa29.35■■■□□ 2.29
TSPAN4-217ENST00000527644 A0A0U1RQF3 1178 aa29.34■■■□□ 2.29
TSPAN4-217ENST00000527644 GATMP50440 423 aa29.34■■■□□ 2.29
TSPAN4-217ENST00000527644 PTPROQ16827 1216 aa29.34■■■□□ 2.29
TSPAN4-217ENST00000527644 FAM102BQ5T8I3 360 aa29.34■■■□□ 2.29
TSPAN4-217ENST00000527644 CATSPER4Q7RTX7 472 aa29.34■■■□□ 2.29
TSPAN4-217ENST00000527644 ECHDC2Q86YB7 292 aa29.34■■■□□ 2.29
TSPAN4-217ENST00000527644 IGSF22Q8N9C0 903 aa29.34■■■□□ 2.29
TSPAN4-217ENST00000527644 C11orf84Q9BUA3 381 aaPredicted RBP29.34■■■□□ 2.29
TSPAN4-217ENST00000527644 PLVAPQ9BX97 442 aa29.34■■■□□ 2.29
TSPAN4-217ENST00000527644 PRDM6Q9NQX0 595 aa29.34■■■□□ 2.29
TSPAN4-217ENST00000527644 A0A0C4DFX4 3053 aa29.34■■■□□ 2.29
TSPAN4-217ENST00000527644 HOXA2O43364 376 aa29.33■■■□□ 2.29
TSPAN4-217ENST00000527644 RNF149Q8NC42 400 aa29.33■■■□□ 2.29
TSPAN4-217ENST00000527644 MRPL38Q96DV4 380 aaKnown RBP29.33■■■□□ 2.29
TSPAN4-217ENST00000527644 TRAIPQ9BWF2 469 aa29.33■■■□□ 2.29
TSPAN4-217ENST00000527644 TBKBP1A7MCY6 615 aa29.32■■■□□ 2.28
TSPAN4-217ENST00000527644 EOMESO95936 686 aa29.32■■■□□ 2.28
TSPAN4-217ENST00000527644 PDCP20941 246 aa29.32■■■□□ 2.28
TSPAN4-217ENST00000527644 ARL2P36404 184 aa29.32■■■□□ 2.28
TSPAN4-217ENST00000527644 CCT6AP40227 531 aaKnown RBP29.32■■■□□ 2.28
TSPAN4-217ENST00000527644 POTEGQ6S5H5 508 aa29.32■■■□□ 2.28
TSPAN4-217ENST00000527644 DTHD1Q6ZMT9 781 aa29.32■■■□□ 2.28
TSPAN4-217ENST00000527644 PIN4Q9Y237 131 aaKnown RBP29.32■■■□□ 2.28
TSPAN4-217ENST00000527644 FGFR1P11362 822 aa29.31■■■□□ 2.28
TSPAN4-217ENST00000527644 PHKA2P46019 1235 aa29.31■■■□□ 2.28
TSPAN4-217ENST00000527644 POU5F1BQ06416 359 aa29.31■■■□□ 2.28
TSPAN4-217ENST00000527644 TFDP1Q14186 410 aa29.31■■■□□ 2.28
TSPAN4-217ENST00000527644 SKIV2LQ15477 1246 aaKnown RBP29.31■■■□□ 2.28
TSPAN4-217ENST00000527644 NAALADL2Q58DX5 795 aa29.31■■■□□ 2.28
TSPAN4-217ENST00000527644 INTS4Q96HW7 963 aaKnown RBP29.31■■■□□ 2.28
TSPAN4-217ENST00000527644 THEGQ9P2T0 379 aa29.31■■■□□ 2.28
TSPAN4-217ENST00000527644 USO1O60763 962 aaKnown RBP29.3■■■□□ 2.28
TSPAN4-217ENST00000527644 ATP2C1P98194 919 aaPredicted RBP29.3■■■□□ 2.28
TSPAN4-217ENST00000527644 TWF2Q6IBS0 349 aaKnown RBP29.3■■■□□ 2.28
TSPAN4-217ENST00000527644 ZNF598Q86UK7 904 aaKnown RBP29.3■■■□□ 2.28
TSPAN4-217ENST00000527644 MCPH1Q8NEM0 835 aa29.3■■■□□ 2.28
TSPAN4-217ENST00000527644 P2RX5Q93086 422 aa29.3■■■□□ 2.28
TSPAN4-217ENST00000527644 TMEM117Q9H0C3 514 aa29.3■■■□□ 2.28
TSPAN4-217ENST00000527644 MINDY3Q9H8M7 445 aa29.3■■■□□ 2.28
TSPAN4-217ENST00000527644 FNDC1Q4ZHG4 1894 aaPredicted RBP29.29■■■□□ 2.28
TSPAN4-217ENST00000527644 SKIP12755 728 aa29.29■■■□□ 2.28
TSPAN4-217ENST00000527644 PTENP60484 403 aa29.29■■■□□ 2.28
TSPAN4-217ENST00000527644 PCBP1Q15365 356 aaKnown RBP eCLIP29.29■■■□□ 2.28
TSPAN4-217ENST00000527644 IL17AQ16552 155 aa29.29■■■□□ 2.28
TSPAN4-217ENST00000527644 BRAPQ7Z569 592 aa29.29■■■□□ 2.28
TSPAN4-217ENST00000527644 ASAP3Q8TDY4 903 aa29.29■■■□□ 2.28
TSPAN4-217ENST00000527644 SNX29Q8TEQ0 813 aa29.29■■■□□ 2.28
TSPAN4-217ENST00000527644 ATXN2LQ8WWM7 1075 aaKnown RBP29.29■■■□□ 2.28
TSPAN4-217ENST00000527644 LMAN2LQ9H0V9 348 aa29.29■■■□□ 2.28
TSPAN4-217ENST00000527644 AGPAT5Q9NUQ2 364 aa29.29■■■□□ 2.28
TSPAN4-217ENST00000527644 ARHGEF35A5YM69 484 aa29.28■■■□□ 2.28
TSPAN4-217ENST00000527644 K7ELQ4 463 aaPredicted RBP29.28■■■□□ 2.28
TSPAN4-217ENST00000527644 ECM1Q16610 540 aa29.28■■■□□ 2.28
TSPAN4-217ENST00000527644 KRT79Q5XKE5 535 aa29.28■■■□□ 2.28
TSPAN4-217ENST00000527644 IFNLR1Q8IU57 520 aaPredicted RBP29.28■■■□□ 2.28
TSPAN4-217ENST00000527644 ABI1Q8IZP0 508 aa29.28■■■□□ 2.28
TSPAN4-217ENST00000527644 RNF169Q8NCN4 708 aa29.28■■■□□ 2.28
TSPAN4-217ENST00000527644 CASD1Q96PB1 797 aa29.28■■■□□ 2.28
TSPAN4-217ENST00000527644 POLR3FQ9H1D9 316 aaPredicted RBP29.28■■■□□ 2.28
TSPAN4-217ENST00000527644 AAASQ9NRG9 546 aa29.28■■■□□ 2.28
TSPAN4-217ENST00000527644 RNF19AQ9NV58 838 aa29.28■■■□□ 2.28
TSPAN4-217ENST00000527644 KIAA1024Q9UPX6 916 aa29.28■■■□□ 2.28
TSPAN4-217ENST00000527644 GLRA2P23416 452 aa29.27■■■□□ 2.28
TSPAN4-217ENST00000527644 CAPSQ13938 189 aa29.27■■■□□ 2.28
TSPAN4-217ENST00000527644 TIGD5Q53EQ6 642 aa29.27■■■□□ 2.28
TSPAN4-217ENST00000527644 SPOUT1Q5T280 376 aaKnown RBP29.27■■■□□ 2.28
TSPAN4-217ENST00000527644 PADI6Q6TGC4 694 aa29.27■■■□□ 2.28
TSPAN4-217ENST00000527644 NFKBIZQ9BYH8 718 aa29.27■■■□□ 2.28
TSPAN4-217ENST00000527644 TYW1Q9NV66 732 aaKnown RBP29.27■■■□□ 2.28
TSPAN4-217ENST00000527644 COG5Q9UP83 839 aa29.27■■■□□ 2.28
TSPAN4-217ENST00000527644 PLAGL2Q9UPG8 496 aa29.27■■■□□ 2.28
TSPAN4-217ENST00000527644 GRM6O15303 877 aa29.26■■■□□ 2.27
TSPAN4-217ENST00000527644 ATF7P17544 494 aaPredicted RBP29.26■■■□□ 2.27
TSPAN4-217ENST00000527644 CYP11B2P19099 503 aa29.26■■■□□ 2.27
TSPAN4-217ENST00000527644 RAB27AP51159 221 aa29.26■■■□□ 2.27
TSPAN4-217ENST00000527644 ARL6IP4Q66PJ3 421 aaKnown RBP29.26■■■□□ 2.27
TSPAN4-217ENST00000527644 FAM105AQ9NUU6 356 aa29.26■■■□□ 2.27
TSPAN4-217ENST00000527644 PCDHB12Q9Y5F1 795 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms