RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 BMP15O95972 392 aa18.78■□□□□ 0.6
NR1H3-229ENST00000527464 RB1P06400 928 aa18.78■□□□□ 0.6
NR1H3-229ENST00000527464 CCT6AP40227 531 aaKnown RBP18.78■□□□□ 0.6
NR1H3-229ENST00000527464 PCBP1Q15365 356 aaKnown RBP eCLIP18.78■□□□□ 0.6
NR1H3-229ENST00000527464 EPC2Q52LR7 807 aa18.78■□□□□ 0.6
NR1H3-229ENST00000527464 SPRED2Q7Z698 418 aa18.78■□□□□ 0.6
NR1H3-229ENST00000527464 KSR1Q8IVT5 923 aa18.78■□□□□ 0.6
NR1H3-229ENST00000527464 TMEM192Q8IY95 271 aa18.78■□□□□ 0.6
NR1H3-229ENST00000527464 MCPH1Q8NEM0 835 aa18.78■□□□□ 0.6
NR1H3-229ENST00000527464 C17orf80Q9BSJ5 609 aa18.78■□□□□ 0.6
NR1H3-229ENST00000527464 TRAIPQ9BWF2 469 aa18.78■□□□□ 0.6
NR1H3-229ENST00000527464 MTCH2Q9Y6C9 303 aa18.78■□□□□ 0.6
NR1H3-229ENST00000527464 PRUNE2Q8WUY3 3088 aa18.77■□□□□ 0.6
NR1H3-229ENST00000527464 HOXA2O43364 376 aa18.77■□□□□ 0.6
NR1H3-229ENST00000527464 ARL2P36404 184 aa18.77■□□□□ 0.6
NR1H3-229ENST00000527464 PHKA2P46019 1235 aa18.77■□□□□ 0.6
NR1H3-229ENST00000527464 TFDP1Q14186 410 aa18.77■□□□□ 0.6
NR1H3-229ENST00000527464 KRT79Q5XKE5 535 aa18.77■□□□□ 0.6
NR1H3-229ENST00000527464 POTEGQ6S5H5 508 aa18.77■□□□□ 0.6
NR1H3-229ENST00000527464 KCTD17Q8N5Z5 321 aa18.77■□□□□ 0.6
NR1H3-229ENST00000527464 MTUS1Q9ULD2 1270 aa18.77■□□□□ 0.6
NR1H3-229ENST00000527464 A0A0C4DFX4 3053 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 FNDC1Q4ZHG4 1894 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-229ENST00000527464 A0A0U1RQF3 1178 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 VPS37CA5D8V6 355 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-229ENST00000527464 C5orf67F2Z3F1 127 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 EOMESO95936 686 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 SRGAP2CP0DJJ0 459 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 SKIP12755 728 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 FGFR4P22455 802 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 BMPR1AP36894 532 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 CATSPER4Q7RTX7 472 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 IFNLR1Q8IU57 520 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-229ENST00000527464 RNF149Q8NC42 400 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 SLC17A8Q8NDX2 589 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 SNX29Q8TEQ0 813 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 RSPH1Q8WYR4 309 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 PLVAPQ9BX97 442 aa18.76■□□□□ 0.59
NR1H3-229ENST00000527464 BMP2KQ9NSY1 1161 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-229ENST00000527464 ARHGEF35A5YM69 484 aa18.75■□□□□ 0.59
NR1H3-229ENST00000527464 H3BNC9 293 aa18.75■□□□□ 0.59
NR1H3-229ENST00000527464 USO1O60763 962 aaKnown RBP18.75■□□□□ 0.59
NR1H3-229ENST00000527464 CSDE1O75534 798 aaKnown RBP18.75■□□□□ 0.59
NR1H3-229ENST00000527464 LINC00271P0C7V0 271 aa18.75■□□□□ 0.59
NR1H3-229ENST00000527464 SYT1P21579 422 aa18.75■□□□□ 0.59
NR1H3-229ENST00000527464 PTENP60484 403 aa18.75■□□□□ 0.59
NR1H3-229ENST00000527464 IL17AQ16552 155 aa18.75■□□□□ 0.59
NR1H3-229ENST00000527464 ECHDC2Q86YB7 292 aa18.75■□□□□ 0.59
NR1H3-229ENST00000527464 HSCBQ8IWL3 235 aa18.75■□□□□ 0.59
NR1H3-229ENST00000527464 GDPD5Q8WTR4 605 aa18.75■□□□□ 0.59
NR1H3-229ENST00000527464 NFKBIZQ9BYH8 718 aa18.75■□□□□ 0.59
NR1H3-229ENST00000527464 BRWD1Q9NSI6 2320 aa18.75■□□□□ 0.59
NR1H3-229ENST00000527464 CUL9Q8IWT3 2517 aa18.75■□□□□ 0.59
NR1H3-229ENST00000527464 COL4A4P53420 1690 aaPredicted RBP18.75■□□□□ 0.59
NR1H3-229ENST00000527464 MYO7AQ13402 2215 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 EYSQ5T1H1 3165 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 A0A087WWV3 80 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 SLC26A4O43511 780 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 PDIA4P13667 645 aaKnown RBP18.74■□□□□ 0.59
NR1H3-229ENST00000527464 CYP11B2P19099 503 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 CTNNB1P35222 781 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 RAB27AP51159 221 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 PTPROQ16827 1216 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 NAALADL2Q58DX5 795 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 PADI6Q6TGC4 694 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 C11orf84Q9BUA3 381 aaPredicted RBP18.74■□□□□ 0.59
NR1H3-229ENST00000527464 TMEM117Q9H0C3 514 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 AGPAT5Q9NUQ2 364 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 KIAA1024Q9UPX6 916 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 DNM3Q9UQ16 869 aa18.74■□□□□ 0.59
NR1H3-229ENST00000527464 PIN4Q9Y237 131 aaKnown RBP18.74■□□□□ 0.59
NR1H3-229ENST00000527464 ZNF623O75123 536 aa18.73■□□□□ 0.59
NR1H3-229ENST00000527464 GLRA2P23416 452 aa18.73■□□□□ 0.59
NR1H3-229ENST00000527464 AXLP30530 894 aa18.73■□□□□ 0.59
NR1H3-229ENST00000527464 GPM6BQ13491 265 aa18.73■□□□□ 0.59
NR1H3-229ENST00000527464 CAPSQ13938 189 aa18.73■□□□□ 0.59
NR1H3-229ENST00000527464 ECM1Q16610 540 aa18.73■□□□□ 0.59
NR1H3-229ENST00000527464 FAM102BQ5T8I3 360 aa18.73■□□□□ 0.59
NR1H3-229ENST00000527464 TWF2Q6IBS0 349 aaKnown RBP18.73■□□□□ 0.59
NR1H3-229ENST00000527464 ZNF598Q86UK7 904 aaKnown RBP18.73■□□□□ 0.59
NR1H3-229ENST00000527464 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.73■□□□□ 0.59
NR1H3-229ENST00000527464 ASAP3Q8TDY4 903 aa18.73■□□□□ 0.59
NR1H3-229ENST00000527464 P2RX5Q93086 422 aa18.73■□□□□ 0.59
NR1H3-229ENST00000527464 AK8Q96MA6 479 aa18.73■□□□□ 0.59
NR1H3-229ENST00000527464 LMAN2LQ9H0V9 348 aa18.73■□□□□ 0.59
NR1H3-229ENST00000527464 POLR3FQ9H1D9 316 aaPredicted RBP18.73■□□□□ 0.59
NR1H3-229ENST00000527464 MINDY3Q9H8M7 445 aa18.73■□□□□ 0.59
NR1H3-229ENST00000527464 DDX19AQ9NUU7 478 aaKnown RBP18.73■□□□□ 0.59
NR1H3-229ENST00000527464 MRPL42Q9Y6G3 142 aaKnown RBP18.73■□□□□ 0.59
NR1H3-229ENST00000527464 VWA3AA6NCI4 1184 aa18.72■□□□□ 0.59
NR1H3-229ENST00000527464 TBKBP1A7MCY6 615 aa18.72■□□□□ 0.59
NR1H3-229ENST00000527464 ERLIN2O94905 339 aa18.72■□□□□ 0.59
NR1H3-229ENST00000527464 EYA4O95677 639 aa18.72■□□□□ 0.59
NR1H3-229ENST00000527464 IBSPP21815 317 aaPredicted RBP18.72■□□□□ 0.59
NR1H3-229ENST00000527464 NCBP1Q09161 790 aaKnown RBP18.72■□□□□ 0.59
NR1H3-229ENST00000527464 PAN2Q504Q3 1202 aaKnown RBP18.72■□□□□ 0.59
NR1H3-229ENST00000527464 HYIQ5T013 277 aa18.72■□□□□ 0.59
NR1H3-229ENST00000527464 ABI1Q8IZP0 508 aa18.72■□□□□ 0.59
NR1H3-229ENST00000527464 PPM1EQ8WY54 764 aa18.72■□□□□ 0.59
NR1H3-229ENST00000527464 MRPL38Q96DV4 380 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms