RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 MTMR6Q9Y217 621 aa9.91□□□□□ -0.82
CCDC90B-208ENST00000527025 AKT3Q9Y243 479 aa9.91□□□□□ -0.82
CCDC90B-208ENST00000527025 COL4A4P53420 1690 aaPredicted RBP9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 VCANP13611 3396 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 NLRC5Q86WI3 1866 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 H3BQV1 296 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 EFCAB14O75071 495 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 DGKIO75912 1065 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 DARSP14868 501 aaKnown RBP9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 EIF4BP23588 611 aaKnown RBP9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 DDIT3P35638 169 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 RARRES1P49788 294 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 FAM189BP81408 668 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 GRIN1Q05586 938 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 PAK2Q13177 524 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 ORC2Q13416 577 aaPredicted RBP9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 GNL2Q13823 731 aaKnown RBP9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 BECN1Q14457 450 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 KCNK18Q7Z418 384 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 RHPN2Q8IUC4 686 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 LRRC15Q8TF66 581 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 ARNTL2Q8WYA1 636 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 ZNF689Q96CS4 500 aaPredicted RBP9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 ADAM2Q99965 735 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 C17orf80Q9BSJ5 609 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 ZBED2Q9BTP6 218 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 POLR3CQ9BUI4 534 aaPredicted RBP9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 RGS18Q9NS28 235 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 MTUS1Q9ULD2 1270 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 NOL7Q9UMY1 257 aaKnown RBP9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 KIAA1671Q9BY89 1806 aa9.9□□□□□ -0.82
CCDC90B-208ENST00000527025 FNDC1Q4ZHG4 1894 aaPredicted RBP9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 C9IYK1 514 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 M0QZ92 97 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 RPLP2P05387 115 aaKnown RBP9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 PDCP20941 246 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 RPA1P27694 616 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 TMOD1P28289 359 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 ARL2P36404 184 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 ERVK-21P61565 698 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 ATP2C1P98194 919 aaPredicted RBP9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 LAMTOR4Q0VGL1 99 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 RESTQ13127 1097 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 PDIA5Q14554 519 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 EMC2Q15006 297 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 RILPL1Q5EBL4 403 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 FAM102BQ5T8I3 360 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 SPRYD3Q8NCJ5 442 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 ASAP3Q8TDY4 903 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 PNMA5Q96PV4 448 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 MAP7D2Q96T17 732 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 TUFT1Q9NNX1 390 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 GPRC5CQ9NQ84 441 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 ANKEF1Q9NU02 776 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 RNF19AQ9NV58 838 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 HCSTQ9UBK5 93 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 INSL6Q9Y581 213 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 ATG2AQ2TAZ0 1938 aa9.89□□□□□ -0.83
CCDC90B-208ENST00000527025 PRRC2BQ5JSZ5 2229 aaKnown RBP9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 VPS37CA5D8V6 355 aaPredicted RBP9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 GPR182O15218 404 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 SRGAP2CP0DJJ0 459 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 XRCC6P12956 609 aaKnown RBP eCLIP9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 FOSL2P15408 326 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 GLRA2P23416 452 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 HOXA11P31270 313 aaPredicted RBP9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 RFC5P40937 340 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 PRPHP41219 470 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 POLGP54098 1239 aaPredicted RBP9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 GRB10Q13322 594 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 PKP1Q13835 747 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 PTPAQ15257 358 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 MAEAQ7L5Y9 396 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 OTUD6AQ7L8S5 288 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 NEK9Q8TD19 979 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 NLRP7Q8WX94 980 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 SLC7A3Q8WY07 619 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 BSNDQ8WZ55 320 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 NLRP4Q96MN2 994 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 FTHL17Q9BXU8 183 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 PRDM6Q9NQX0 595 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 LRWD1Q9UFC0 647 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 KIAA1024Q9UPX6 916 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 RBM19Q9Y4C8 960 aaKnown RBP9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 COL4A3BPQ9Y5P4 624 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 CLIC4Q9Y696 253 aa9.88□□□□□ -0.83
CCDC90B-208ENST00000527025 VWA3AA6NCI4 1184 aa9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 MEIS3P2A8K0S8 358 aa9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 E9PMD0 336 aa9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 STX6O43752 255 aa9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 DKC1O60832 514 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 FGFR1P11362 822 aa9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 ATF7P17544 494 aaPredicted RBP9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 IBSPP21815 317 aaPredicted RBP9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 CCT6AP40227 531 aaKnown RBP9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 SARSP49591 514 aaKnown RBP9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 CAPSQ13938 189 aa9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 SF3A1Q15459 793 aaKnown RBP9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 DTHD1Q6ZMT9 781 aa9.87□□□□□ -0.83
CCDC90B-208ENST00000527025 LRRC55Q6ZSA7 311 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms