RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 LINC00271P0C7V0 271 aa12.41□□□□□ -0.42
SNRNP35-203ENST00000526639 STAG3L1P0CL83 205 aa12.41□□□□□ -0.42
SNRNP35-203ENST00000526639 FGFR1P11362 822 aa12.41□□□□□ -0.42
SNRNP35-203ENST00000526639 EMC2Q15006 297 aa12.41□□□□□ -0.42
SNRNP35-203ENST00000526639 LARP1BQ659C4 914 aaKnown RBP12.41□□□□□ -0.42
SNRNP35-203ENST00000526639 JPH2Q9BR39 696 aaPredicted RBP12.41□□□□□ -0.42
SNRNP35-203ENST00000526639 IFT122Q9HBG6 1241 aa12.41□□□□□ -0.42
SNRNP35-203ENST00000526639 COL4A3BPQ9Y5P4 624 aa12.41□□□□□ -0.42
SNRNP35-203ENST00000526639 COL4A4P53420 1690 aaPredicted RBP12.4□□□□□ -0.42
SNRNP35-203ENST00000526639 POU3F3P20264 500 aaPredicted RBP12.4□□□□□ -0.42
SNRNP35-203ENST00000526639 CTNNB1P35222 781 aa12.4□□□□□ -0.42
SNRNP35-203ENST00000526639 RFC5P40937 340 aa12.4□□□□□ -0.42
SNRNP35-203ENST00000526639 CDC42EP1Q00587 391 aa12.4□□□□□ -0.42
SNRNP35-203ENST00000526639 DSC3Q14574 896 aa12.4□□□□□ -0.42
SNRNP35-203ENST00000526639 ZNF710Q8N1W2 664 aa12.4□□□□□ -0.42
SNRNP35-203ENST00000526639 PSPC1Q8WXF1 523 aaKnown RBP12.4□□□□□ -0.42
SNRNP35-203ENST00000526639 MTRQ99707 1265 aa12.4□□□□□ -0.42
SNRNP35-203ENST00000526639 C1orf112Q9NSG2 853 aa12.4□□□□□ -0.42
SNRNP35-203ENST00000526639 ZDHHC9Q9Y397 364 aa12.4□□□□□ -0.42
SNRNP35-203ENST00000526639 COL4A6Q14031 1691 aa12.4□□□□□ -0.42
SNRNP35-203ENST00000526639 LYPLA2O95372 231 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 SYT1P21579 422 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 RARRES1P49788 294 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 LAMTOR4Q0VGL1 99 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 ORC2Q13416 577 aaPredicted RBP12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 GPM6BQ13491 265 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 POTEGQ6S5H5 508 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 MAEAQ7L5Y9 396 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 ZNF410Q86VK4 478 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 RNF169Q8NCN4 708 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 NEK9Q8TD19 979 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 CCDC43Q96MW1 224 aaKnown RBP12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 XPNPEP1Q9NQW7 623 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 HCSTQ9UBK5 93 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 MRPL42Q9Y6G3 142 aaKnown RBP12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 TBKBP1A7MCY6 615 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 H3BNC9 293 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 BRD1O95696 1058 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 CDC25AP30304 524 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 BMPR1AP36894 532 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 ECM1Q16610 540 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 LONRF3Q496Y0 759 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 EXOC8Q8IYI6 725 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 RNF149Q8NC42 400 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 CLP1Q92989 425 aaKnown RBP12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 MINDY3Q9H8M7 445 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 ANKEF1Q9NU02 776 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 LRWD1Q9UFC0 647 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 NLRC5Q86WI3 1866 aa12.39□□□□□ -0.43
SNRNP35-203ENST00000526639 STX6O43752 255 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 USO1O60763 962 aaKnown RBP12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 DGAT1O75907 488 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 SFPQP23246 707 aaKnown RBP eCLIP12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 FAM189BP81408 668 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 TFF2Q03403 129 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 IL17AQ16552 155 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 RILPL1Q5EBL4 403 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 CATSPER4Q7RTX7 472 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 FERMT3Q86UX7 667 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 CMTR2Q8IYT2 770 aaKnown RBP12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 ERMNQ8TAM6 284 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 TCP11Q8WWU5 503 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 SAMD11Q96NU1 681 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 INO80BQ9C086 356 aaPredicted RBP12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 ATP6V0A4Q9HBG4 840 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 TUFT1Q9NNX1 390 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 ALG13Q9NP73 1137 aaKnown RBP12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 TMEM161AQ9NX61 479 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 PIN4Q9Y237 131 aaKnown RBP12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 PPME1Q9Y570 386 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 ARID2Q68CP9 1835 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 PP2D1A8MPX8 630 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 PDCP20941 246 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 RPA1P27694 616 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 SPOUT1Q5T280 376 aaKnown RBP12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 TWF2Q6IBS0 349 aaKnown RBP12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 ECHDC2Q86YB7 292 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 POLR3CQ9BUI4 534 aaPredicted RBP12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 GPRC5CQ9NQ84 441 aa12.38□□□□□ -0.43
SNRNP35-203ENST00000526639 MYO7AQ13402 2215 aa12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 A0A0U1RQF3 1178 aa12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 GRM6O15303 877 aa12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 GAS2O43903 313 aaKnown RBP12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 CCT6AP40227 531 aaKnown RBP12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 IGSF22Q8N9C0 903 aa12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 NACC1Q96RE7 527 aa12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 ELAC1Q9H777 363 aaKnown RBP12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 POLD4Q9HCU8 107 aa12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 TYW1Q9NV66 732 aaKnown RBP12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 DACT1Q9NYF0 836 aa12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 THEGQ9P2T0 379 aa12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 KIAA1024Q9UPX6 916 aa12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 MTMR6Q9Y217 621 aa12.37□□□□□ -0.43
SNRNP35-203ENST00000526639 VPS37CA5D8V6 355 aaPredicted RBP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 C5orf67F2Z3F1 127 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 DLL1O00548 723 aa12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 XRCC6P12956 609 aaKnown RBP eCLIP12.36□□□□□ -0.43
SNRNP35-203ENST00000526639 PDIA5Q14554 519 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms