RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 MSH4O15457 936 aa13.21□□□□□ -0.29
CAPN1-204ENST00000526468 PRPF3O43395 683 aaKnown RBP13.21□□□□□ -0.29
CAPN1-204ENST00000526468 DARSP14868 501 aaKnown RBP13.21□□□□□ -0.29
CAPN1-204ENST00000526468 EIF4BP23588 611 aaKnown RBP13.21□□□□□ -0.29
CAPN1-204ENST00000526468 SFNP31947 248 aa13.21□□□□□ -0.29
CAPN1-204ENST00000526468 CIITAP33076 1130 aa13.21□□□□□ -0.29
CAPN1-204ENST00000526468 VCPP55072 806 aaKnown RBP13.21□□□□□ -0.29
CAPN1-204ENST00000526468 MTERF2Q49AM1 385 aa13.21□□□□□ -0.29
CAPN1-204ENST00000526468 SYCE2Q6PIF2 218 aa13.21□□□□□ -0.29
CAPN1-204ENST00000526468 CASP10Q92851 521 aa13.21□□□□□ -0.29
CAPN1-204ENST00000526468 GJA10Q969M2 543 aa13.21□□□□□ -0.29
CAPN1-204ENST00000526468 PRRX2Q99811 253 aa13.21□□□□□ -0.29
CAPN1-204ENST00000526468 RNF26Q9BY78 433 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-204ENST00000526468 UNC45AQ9H3U1 944 aa13.21□□□□□ -0.29
CAPN1-204ENST00000526468 DACT1Q9NYF0 836 aa13.21□□□□□ -0.29
CAPN1-204ENST00000526468 NR2E1Q9Y466 385 aa13.21□□□□□ -0.29
CAPN1-204ENST00000526468 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-204ENST00000526468 ZC3H11AO75152 810 aaKnown RBP eCLIP13.2□□□□□ -0.3
CAPN1-204ENST00000526468 SFPQP23246 707 aaKnown RBP eCLIP13.2□□□□□ -0.3
CAPN1-204ENST00000526468 FAM189BP81408 668 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 KCNC3Q14003 757 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 C8orf34Q49A92 452 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 TPRNQ4KMQ1 711 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 IER5LQ5T953 404 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 TMEM184AQ6ZMB5 413 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 MIER3Q7Z3K6 550 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 SLC39A11Q8N1S5 342 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 ZNF710Q8N1W2 664 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 SLC5A5Q92911 643 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 TMEM169Q96HH4 297 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 RIT2Q99578 217 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 NRBP2Q9NSY0 501 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 PIN4Q9Y237 131 aaKnown RBP13.2□□□□□ -0.3
CAPN1-204ENST00000526468 INPP5FQ9Y2H2 1132 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 SNX14Q9Y5W7 946 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 HCFC2Q9Y5Z7 792 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 FANCMQ8IYD8 2048 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 MYH11P35749 1972 aa13.2□□□□□ -0.3
CAPN1-204ENST00000526468 GVINP1Q7Z2Y8 2422 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 TMEM150BA6NC51 233 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 C2orf71A6NGG8 1288 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 CSDE1O75534 798 aaKnown RBP13.19□□□□□ -0.3
CAPN1-204ENST00000526468 HOXB8P17481 243 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-204ENST00000526468 RPS6KB1P23443 525 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 NLRP5P59047 1200 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 CCT2P78371 535 aaKnown RBP13.19□□□□□ -0.3
CAPN1-204ENST00000526468 TCF15Q12870 199 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 DRP2Q13474 957 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 MTMR3Q13615 1198 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 TWF2Q6IBS0 349 aaKnown RBP13.19□□□□□ -0.3
CAPN1-204ENST00000526468 CES5AQ6NT32 575 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 ZNF598Q86UK7 904 aaKnown RBP13.19□□□□□ -0.3
CAPN1-204ENST00000526468 TRIM22Q8IYM9 498 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 ASIC4Q96FT7 647 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 NECTIN4Q96NY8 510 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 GCOM2Q9BZD3 368 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-204ENST00000526468 S1PR5Q9H228 398 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 POMKQ9H5K3 350 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 NCOA5Q9HCD5 579 aaKnown RBP13.19□□□□□ -0.3
CAPN1-204ENST00000526468 FAM86C1Q9NVL1 165 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 VWA8A3KMH1 1905 aa13.19□□□□□ -0.3
CAPN1-204ENST00000526468 MYO15AQ9UKN7 3530 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 CFAP54Q96N23 3096 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 A0A0U1RQF3 1178 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 NT5C1B-RDH14C9J2C7 533 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 TDP2O95551 362 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 WEE2P0C1S8 567 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 IFNAR1P17181 557 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 HSPA4P34932 840 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 ALDH7A1P49419 539 aaKnown RBP13.18□□□□□ -0.3
CAPN1-204ENST00000526468 BCAR1P56945 870 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 BMS1Q14692 1282 aaKnown RBP13.18□□□□□ -0.3
CAPN1-204ENST00000526468 LONRF3Q496Y0 759 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 RARS2Q5T160 578 aaKnown RBP13.18□□□□□ -0.3
CAPN1-204ENST00000526468 TDRD5Q8NAT2 981 aaKnown RBP13.18□□□□□ -0.3
CAPN1-204ENST00000526468 KREMEN2Q8NCW0 462 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 TBCKQ8TEA7 893 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 LPPQ93052 612 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 SH2D3AQ9BRG2 576 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 CITO14578 2027 aa13.18□□□□□ -0.3
CAPN1-204ENST00000526468 A0A087WZ62 844 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 C2CD4DB7Z1M9 353 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 CLASP2O75122 1294 aaKnown RBP13.17□□□□□ -0.3
CAPN1-204ENST00000526468 EOMESO95936 686 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 PDGFBP01127 241 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-204ENST00000526468 PHKA2P46019 1235 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 RNASELQ05823 741 aaKnown RBP13.17□□□□□ -0.3
CAPN1-204ENST00000526468 ITIH3Q06033 890 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 NTRK3Q16288 839 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 XKR3Q5GH77 459 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 PLA2G4FQ68DD2 849 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 GLB1LQ6UWU2 654 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 TMEM173Q86WV6 379 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-204ENST00000526468 RHPN2Q8IUC4 686 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 VPS52Q8N1B4 723 aa13.17□□□□□ -0.3
CAPN1-204ENST00000526468 RDM1Q8NG50 284 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms