RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 RB1P06400 928 aa18.96■□□□□ 0.63
CCS-203ENST00000526058 SRGAP2CP0DJJ0 459 aa18.96■□□□□ 0.63
CCS-203ENST00000526058 RARRES1P49788 294 aa18.96■□□□□ 0.63
CCS-203ENST00000526058 FERMT3Q86UX7 667 aa18.96■□□□□ 0.63
CCS-203ENST00000526058 PSPC1Q8WXF1 523 aaKnown RBP18.96■□□□□ 0.63
CCS-203ENST00000526058 MRPL38Q96DV4 380 aaKnown RBP18.96■□□□□ 0.63
CCS-203ENST00000526058 COL25A1Q9BXS0 654 aaPredicted RBP18.96■□□□□ 0.63
CCS-203ENST00000526058 ELAC1Q9H777 363 aaKnown RBP18.96■□□□□ 0.63
CCS-203ENST00000526058 GTF3C3Q9Y5Q9 886 aa18.96■□□□□ 0.63
CCS-203ENST00000526058 H3BQV1 296 aa18.95■□□□□ 0.62
CCS-203ENST00000526058 GRM6O15303 877 aa18.95■□□□□ 0.62
CCS-203ENST00000526058 SFPQP23246 707 aaKnown RBP eCLIP18.95■□□□□ 0.62
CCS-203ENST00000526058 TFF2Q03403 129 aa18.95■□□□□ 0.62
CCS-203ENST00000526058 PTGDRQ13258 359 aa18.95■□□□□ 0.62
CCS-203ENST00000526058 ECHDC2Q86YB7 292 aa18.95■□□□□ 0.62
CCS-203ENST00000526058 ATXN2LQ8WWM7 1075 aaKnown RBP18.95■□□□□ 0.62
CCS-203ENST00000526058 TCP11Q8WWU5 503 aa18.95■□□□□ 0.62
CCS-203ENST00000526058 C11orf84Q9BUA3 381 aaPredicted RBP18.95■□□□□ 0.62
CCS-203ENST00000526058 POLR3CQ9BUI4 534 aaPredicted RBP18.95■□□□□ 0.62
CCS-203ENST00000526058 INO80BQ9C086 356 aaPredicted RBP18.95■□□□□ 0.62
CCS-203ENST00000526058 MINDY3Q9H8M7 445 aa18.95■□□□□ 0.62
CCS-203ENST00000526058 TUFT1Q9NNX1 390 aa18.95■□□□□ 0.62
CCS-203ENST00000526058 ALG13Q9NP73 1137 aaKnown RBP18.95■□□□□ 0.62
CCS-203ENST00000526058 RNF19AQ9NV58 838 aa18.95■□□□□ 0.62
CCS-203ENST00000526058 RNF216Q9NWF9 866 aaPredicted RBP18.95■□□□□ 0.62
CCS-203ENST00000526058 HCSTQ9UBK5 93 aa18.95■□□□□ 0.62
CCS-203ENST00000526058 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.95■□□□□ 0.62
CCS-203ENST00000526058 A0A0U1RQF3 1178 aa18.94■□□□□ 0.62
CCS-203ENST00000526058 GAS2O43903 313 aaKnown RBP18.94■□□□□ 0.62
CCS-203ENST00000526058 DGAT1O75907 488 aa18.94■□□□□ 0.62
CCS-203ENST00000526058 XRCC6P12956 609 aaKnown RBP eCLIP18.94■□□□□ 0.62
CCS-203ENST00000526058 PTPROQ16827 1216 aa18.94■□□□□ 0.62
CCS-203ENST00000526058 LARP1BQ659C4 914 aaKnown RBP18.94■□□□□ 0.62
CCS-203ENST00000526058 POTEGQ6S5H5 508 aa18.94■□□□□ 0.62
CCS-203ENST00000526058 CATSPER4Q7RTX7 472 aa18.94■□□□□ 0.62
CCS-203ENST00000526058 RNF149Q8NC42 400 aa18.94■□□□□ 0.62
CCS-203ENST00000526058 RNF169Q8NCN4 708 aa18.94■□□□□ 0.62
CCS-203ENST00000526058 ERMNQ8TAM6 284 aa18.94■□□□□ 0.62
CCS-203ENST00000526058 CCDC43Q96MW1 224 aaKnown RBP18.94■□□□□ 0.62
CCS-203ENST00000526058 PLVAPQ9BX97 442 aa18.94■□□□□ 0.62
CCS-203ENST00000526058 CHST12Q9NRB3 414 aa18.94■□□□□ 0.62
CCS-203ENST00000526058 PIN4Q9Y237 131 aaKnown RBP18.94■□□□□ 0.62
CCS-203ENST00000526058 ASAP2O43150 1006 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 ATF7P17544 494 aaPredicted RBP18.93■□□□□ 0.62
CCS-203ENST00000526058 RPA1P27694 616 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 FXR2P51116 673 aaKnown RBP eCLIP18.93■□□□□ 0.62
CCS-203ENST00000526058 MRPS5P82675 430 aaKnown RBP18.93■□□□□ 0.62
CCS-203ENST00000526058 CUL4AQ13619 759 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 IL17AQ16552 155 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 ECM1Q16610 540 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 TJAP1Q5JTD0 557 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 SRGAP1Q7Z6B7 1085 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 ZNF598Q86UK7 904 aaKnown RBP18.93■□□□□ 0.62
CCS-203ENST00000526058 ASAP3Q8TDY4 903 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 CASD1Q96PB1 797 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 ASB2Q96Q27 587 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 NACC1Q96RE7 527 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.93■□□□□ 0.62
CCS-203ENST00000526058 TYW1Q9NV66 732 aaKnown RBP18.93■□□□□ 0.62
CCS-203ENST00000526058 DACT1Q9NYF0 836 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 PLAGL2Q9UPG8 496 aa18.93■□□□□ 0.62
CCS-203ENST00000526058 TCF20Q9UGU0 1960 aaKnown RBP18.93■□□□□ 0.62
CCS-203ENST00000526058 PLXNA4Q9HCM2 1894 aa18.92■□□□□ 0.62
CCS-203ENST00000526058 BDP1A6H8Y1 2624 aa18.92■□□□□ 0.62
CCS-203ENST00000526058 USO1O60763 962 aaKnown RBP18.92■□□□□ 0.62
CCS-203ENST00000526058 CSPG5O95196 566 aa18.92■□□□□ 0.62
CCS-203ENST00000526058 ITGB1P05556 798 aa18.92■□□□□ 0.62
CCS-203ENST00000526058 ARL2P36404 184 aa18.92■□□□□ 0.62
CCS-203ENST00000526058 CLLU1OSQ5K130 101 aa18.92■□□□□ 0.62
CCS-203ENST00000526058 SPOUT1Q5T280 376 aaKnown RBP18.92■□□□□ 0.62
CCS-203ENST00000526058 TWF2Q6IBS0 349 aaKnown RBP18.92■□□□□ 0.62
CCS-203ENST00000526058 MAEAQ7L5Y9 396 aa18.92■□□□□ 0.62
CCS-203ENST00000526058 KLHL23Q8NBE8 558 aa18.92■□□□□ 0.62
CCS-203ENST00000526058 TMEM117Q9H0C3 514 aa18.92■□□□□ 0.62
CCS-203ENST00000526058 LRWD1Q9UFC0 647 aa18.92■□□□□ 0.62
CCS-203ENST00000526058 DBR1Q9UK59 544 aaKnown RBP18.92■□□□□ 0.62
CCS-203ENST00000526058 NCOR1O75376 2440 aa18.92■□□□□ 0.62
CCS-203ENST00000526058 MUC3AQ02505 3323 aa18.92■□□□□ 0.62
CCS-203ENST00000526058 EOMESO95936 686 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 DNAJB1P25685 340 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 CCT6AP40227 531 aaKnown RBP18.91■□□□□ 0.62
CCS-203ENST00000526058 PHKA2P46019 1235 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 CAMK1Q14012 370 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 PDIA5Q14554 519 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 MXD4Q14582 209 aaPredicted RBP18.91■□□□□ 0.62
CCS-203ENST00000526058 LONRF3Q496Y0 759 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 RILPL1Q5EBL4 403 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 LRRC55Q6ZSA7 311 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 IGSF22Q8N9C0 903 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 SPPL3Q8TCT6 385 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 LPPQ93052 612 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 P2RX5Q93086 422 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 HLA-CQ95604 372 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 LMAN2LQ9H0V9 348 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 CWH43Q9H720 699 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 GPRC5CQ9NQ84 441 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 AGPAT5Q9NUQ2 364 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 COG5Q9UP83 839 aa18.91■□□□□ 0.62
CCS-203ENST00000526058 PP2D1A8MPX8 630 aa18.9■□□□□ 0.62
CCS-203ENST00000526058 HOXA2O43364 376 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms