RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 TRAF1Q13077 416 aa8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 PAN2Q504Q3 1202 aaKnown RBP8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 TSHZ1Q6ZSZ6 1077 aa8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 RTN4RL1Q86UN2 441 aaPredicted RBP8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 ZNF589Q86UQ0 364 aaPredicted RBP8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 FCHSD1Q86WN1 690 aa8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 NPAS4Q8IUM7 802 aa8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 RHBDD1Q8TEB9 315 aa8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 ATP8B4Q8TF62 1192 aa8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 DNAJB3Q8WWF6 145 aa8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 NEK1Q96PY6 1258 aa8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 AGO3Q9H9G7 860 aaKnown RBP8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 ZMIZ1Q9ULJ6 1067 aa8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 CDY2AQ9Y6F7 541 aa8.6□□□□□ -1.03
CLNS1A-205ENST00000526009 FAM186AA6NE01 2351 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 B4E1Z4 1266 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 KLRF2D3W0D1 207 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 PPP1R11O60927 126 aaPredicted RBP8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 RPLP2P05387 115 aaKnown RBP8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 SRGAP2BP0DMP2 458 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 MRPS9P82933 396 aaKnown RBP8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 RBM10P98175 930 aaKnown RBP8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 SP4Q02446 784 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 UBE3AQ05086 875 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 PPFIA1Q13136 1202 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 ELOAQ14241 798 aaKnown RBP8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 C4orf17Q53FE4 359 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 RUFY4Q6ZNE9 571 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 TICAM2Q86XR7 235 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 STAG2Q8N3U4 1231 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 ENAHQ8N8S7 591 aaPredicted RBP8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 STK32AQ8WU08 396 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 NKD2Q969F2 451 aaPredicted RBP8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 MTMR8Q96EF0 704 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 INPP4AQ96PE3 977 aaPredicted RBP8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 CDCA3Q99618 268 aaPredicted RBP8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 SENP7Q9BQF6 1050 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 TIMMDC1Q9NPL8 285 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 RTEL1Q9NZ71 1219 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 SCHIP1Q9P0W5 487 aaPredicted RBP8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 ZSWIM5Q9P217 1185 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 TUBE1Q9UJT0 475 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 RCAN3Q9UKA8 241 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 PCDHB12Q9Y5F1 795 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 PCDHGC5Q9Y5F6 944 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 SQORQ9Y6N5 450 aa8.59□□□□□ -1.03
CLNS1A-205ENST00000526009 CD52P31358 61 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 TCF7P36402 384 aaPredicted RBP8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 ERVFC1P60507 584 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 MRPS6P82932 125 aaKnown RBP8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 NMIQ13287 307 aaPredicted RBP8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 GRIK4Q16099 956 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 DUSP6Q16828 381 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 SPOUT1Q5T280 376 aaKnown RBP8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 IER5Q5VY09 327 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 PDE12Q6L8Q7 609 aaKnown RBP8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 ANKRD54Q6NXT1 300 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 TMEM184AQ6ZMB5 413 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 HOMER1Q86YM7 354 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 SLC9A9Q8IVB4 645 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 UBALD2Q8IYN6 164 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 TMEM105Q8N8V8 129 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 KREMEN2Q8NCW0 462 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 GIMAP8Q8ND71 665 aaPredicted RBP8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 VN1R2Q8NFZ6 395 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 LINC01599Q8WXQ3 324 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 NIFKQ9BYG3 293 aaKnown RBP8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 TSPAN10Q9H1Z9 355 aaPredicted RBP8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 S1PR5Q9H228 398 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 LRFN2Q9ULH4 789 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 SORCS3Q9UPU3 1222 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 NR2E1Q9Y466 385 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 TELO2Q9Y4R8 837 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 PCDHB7Q9Y5E2 793 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 USP3Q9Y6I4 520 aa8.58□□□□□ -1.04
CLNS1A-205ENST00000526009 PLXNA3P51805 1871 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 CACNA1AO00555 2505 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 SALL3Q9BXA9 1300 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 MYH6P13533 1939 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 MBLAC1A4D2B0 266 aaPredicted RBP8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 M0QZ92 97 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 FGF18O76093 207 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 SCG2P13521 617 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 HOXB8P17481 243 aaPredicted RBP8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 SP100P23497 879 aaPredicted RBP8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 MARK3P27448 753 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 TECP42680 631 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 PLA2G4AP47712 749 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 GATMP50440 423 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 EPHA4P54764 986 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 MFAP1P55081 439 aaKnown RBP8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 IGBP1P78318 339 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 MTMR3Q13615 1198 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 MARCH8Q5T0T0 291 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 IFIT1BQ5T764 474 aaKnown RBP8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 TMEM164Q5U3C3 297 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 MCTP2Q6DN12 878 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 ADSSL1Q8N142 457 aa8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 SCG3Q8WXD2 468 aaKnown RBP8.57□□□□□ -1.04
CLNS1A-205ENST00000526009 GLG1Q92896 1179 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms