RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 INO80BQ9C086 356 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 ATP6V0A4Q9HBG4 840 aa20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 IFT122Q9HBG6 1241 aa20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 RNF216Q9NWF9 866 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 TMEM161AQ9NX61 479 aa20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 MRPL42Q9Y6G3 142 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 H3BNC9 293 aa20.61■□□□□ 0.89
TSPAN4-215ENST00000525334 LAD1O00515 517 aa20.61■□□□□ 0.89
TSPAN4-215ENST00000525334 DGAT1O75907 488 aa20.61■□□□□ 0.89
TSPAN4-215ENST00000525334 SRGAP2CP0DJJ0 459 aa20.61■□□□□ 0.89
TSPAN4-215ENST00000525334 XRCC6P12956 609 aaKnown RBP eCLIP20.61■□□□□ 0.89
TSPAN4-215ENST00000525334 RPA1P27694 616 aa20.61■□□□□ 0.89
TSPAN4-215ENST00000525334 HAUS3Q68CZ6 603 aa20.61■□□□□ 0.89
TSPAN4-215ENST00000525334 ELAC1Q9H777 363 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-215ENST00000525334 LRWD1Q9UFC0 647 aa20.61■□□□□ 0.89
TSPAN4-215ENST00000525334 RWDD3Q9Y3V2 267 aa20.61■□□□□ 0.89
TSPAN4-215ENST00000525334 KIAA1671Q9BY89 1806 aa20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 C5orf67F2Z3F1 127 aa20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 USO1O60763 962 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 FGFR1P11362 822 aa20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 BMPR1AP36894 532 aa20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 GPM6BQ13491 265 aa20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 FAM102BQ5T8I3 360 aa20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 IGSF22Q8N9C0 903 aa20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 NACC1Q96RE7 527 aa20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 THEGQ9P2T0 379 aa20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 DBR1Q9UK59 544 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 SPTBN5Q9NRC6 3674 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 FNDC1Q4ZHG4 1894 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-215ENST00000525334 TBKBP1A7MCY6 615 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 ASAP2O43150 1006 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 CCT6AP40227 531 aaKnown RBP20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 PRPHP41219 470 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 PDIA5Q14554 519 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 IL17AQ16552 155 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 TJAP1Q5JTD0 557 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 CATSPER4Q7RTX7 472 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 SRGAP1Q7Z6B7 1085 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 ECHDC2Q86YB7 292 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 RNF149Q8NC42 400 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 RAB34Q9BZG1 259 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 MINDY3Q9H8M7 445 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 CHST12Q9NRB3 414 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 DACT1Q9NYF0 836 aa20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 PIN4Q9Y237 131 aaKnown RBP20.59■□□□□ 0.89
TSPAN4-215ENST00000525334 A0A0U1RQF3 1178 aa20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 K7ELQ4 463 aaPredicted RBP20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 RB1P06400 928 aa20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 MUTP22033 750 aa20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 ARL2P36404 184 aa20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 MRPS5P82675 430 aaKnown RBP20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 ATP2C1P98194 919 aaPredicted RBP20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 MXD4Q14582 209 aaPredicted RBP20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 ECM1Q16610 540 aa20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 DTHD1Q6ZMT9 781 aa20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 ASAP3Q8TDY4 903 aa20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 SNX29Q8TEQ0 813 aa20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 SYMPKQ92797 1274 aaKnown RBP20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 ASB2Q96Q27 587 aa20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 C11orf84Q9BUA3 381 aaPredicted RBP20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 RNF19AQ9NV58 838 aa20.58■□□□□ 0.89
TSPAN4-215ENST00000525334 VPS37CA5D8V6 355 aaPredicted RBP20.57■□□□□ 0.88
TSPAN4-215ENST00000525334 PP2D1A8MPX8 630 aa20.57■□□□□ 0.88
TSPAN4-215ENST00000525334 PHKA2P46019 1235 aa20.57■□□□□ 0.88
TSPAN4-215ENST00000525334 CAPSQ13938 189 aa20.57■□□□□ 0.88
TSPAN4-215ENST00000525334 SKIV2LQ15477 1246 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-215ENST00000525334 PTPROQ16827 1216 aa20.57■□□□□ 0.88
TSPAN4-215ENST00000525334 TWF2Q6IBS0 349 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-215ENST00000525334 RNF169Q8NCN4 708 aa20.57■□□□□ 0.88
TSPAN4-215ENST00000525334 MRPL38Q96DV4 380 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-215ENST00000525334 PLVAPQ9BX97 442 aa20.57■□□□□ 0.88
TSPAN4-215ENST00000525334 POLR3FQ9H1D9 316 aaPredicted RBP20.57■□□□□ 0.88
TSPAN4-215ENST00000525334 AGPAT5Q9NUQ2 364 aa20.57■□□□□ 0.88
TSPAN4-215ENST00000525334 ARHGEF35A5YM69 484 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 HOXA2O43364 376 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 ATF7P17544 494 aaPredicted RBP20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 PDCP20941 246 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 GLRA2P23416 452 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 TFDP1Q14186 410 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 MAEAQ7L5Y9 396 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 ZNF598Q86UK7 904 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 INTS4Q96HW7 963 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 TRAIPQ9BWF2 469 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 TMEM117Q9H0C3 514 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 GPRC5CQ9NQ84 441 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 HCSTQ9UBK5 93 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 KIAA1024Q9UPX6 916 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 STK24Q9Y6E0 443 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 TTC28Q96AY4 2481 aa20.56■□□□□ 0.88
TSPAN4-215ENST00000525334 GRM6O15303 877 aa20.55■□□□□ 0.88
TSPAN4-215ENST00000525334 EOMESO95936 686 aa20.55■□□□□ 0.88
TSPAN4-215ENST00000525334 PTENP60484 403 aa20.55■□□□□ 0.88
TSPAN4-215ENST00000525334 KRT79Q5XKE5 535 aa20.55■□□□□ 0.88
TSPAN4-215ENST00000525334 PADI6Q6TGC4 694 aa20.55■□□□□ 0.88
TSPAN4-215ENST00000525334 BRAPQ7Z569 592 aa20.55■□□□□ 0.88
TSPAN4-215ENST00000525334 MCPH1Q8NEM0 835 aa20.55■□□□□ 0.88
TSPAN4-215ENST00000525334 CASD1Q96PB1 797 aa20.55■□□□□ 0.88
TSPAN4-215ENST00000525334 FOXD4L1Q9NU39 408 aa20.55■□□□□ 0.88
TSPAN4-215ENST00000525334 DDX19AQ9NUU7 478 aaKnown RBP20.55■□□□□ 0.88
TSPAN4-215ENST00000525334 COG5Q9UP83 839 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms