RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 PITRM1Q5JRX3 1037 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 THEMIS2Q5TEJ8 643 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 MFSD4BQ5TF39 518 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 MBLAC2Q68D91 279 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 DSTYKQ6XUX3 929 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 C20orf204Q6ZNR8 217 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 GALNT5Q7Z7M9 940 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 ZSCAN30Q86W11 494 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 TMTC1Q8IUR5 882 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 GOLGA6L1Q8N7Z2 621 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 DTWD2Q8NBA8 298 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 SMG8Q8ND04 991 aaKnown RBP6.3□□□□□ -1.4
USP47-204ENST00000525078 NRG4Q8WWG1 115 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 ASB12Q8WXK4 309 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 CHCHD6Q9BRQ6 235 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 RNF208Q9H0X6 261 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 SEMA4AQ9H3S1 761 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 ZMAT3Q9HA38 289 aaKnown RBP6.3□□□□□ -1.4
USP47-204ENST00000525078 ATP6V0A4Q9HBG4 840 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 GGA1Q9UJY5 639 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 SLC13A4Q9UKG4 626 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 NSFL1CQ9UNZ2 370 aaKnown RBP6.3□□□□□ -1.4
USP47-204ENST00000525078 B3GALT1Q9Y5Z6 326 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 ACTL7BQ9Y614 415 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 A0A088AWK7 358 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 A0A1W2PPL8 197 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 FSD2A1L4K1 749 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 MEGF11A6BM72 1044 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 SYNDIG1LA6NDD5 238 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 GOLGA6L3A6NEY3 463 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 RNF225M0QZC1 329 aaPredicted RBP6.29□□□□□ -1.4
USP47-204ENST00000525078 M0R082 166 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 MAN2B1O00754 1011 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 PHGDHO43175 533 aaKnown RBP6.29□□□□□ -1.4
USP47-204ENST00000525078 CBX7O95931 251 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 ATP1A3P13637 1013 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 BRAFP15056 766 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 VEGFAP15692 232 aaPredicted RBP6.29□□□□□ -1.4
USP47-204ENST00000525078 RAB6AP20340 208 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 EDNRBP24530 442 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 HOXD12P35452 270 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 MAP2K6P52564 334 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 GALNT1Q10472 559 aaPredicted RBP6.29□□□□□ -1.4
USP47-204ENST00000525078 MOGSQ13724 837 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 KIF22Q14807 665 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 EPHA7Q15375 998 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 TIGD6Q17RP2 521 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 C3orf36Q3SXR2 165 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 CCDC92Q53HC0 331 aaPredicted RBP6.29□□□□□ -1.4
USP47-204ENST00000525078 ANKRD45Q5TZF3 282 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 KLHDC7AQ5VTJ3 777 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 FDX2Q6P4F2 183 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 C8orf86Q6ZUL3 223 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 BRINP3Q76B58 766 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 NME9Q86XW9 330 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 ZNF417Q8TAU3 575 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 RUBCNQ92622 972 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 HDAC10Q969S8 669 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 MTFMTQ96DP5 389 aaKnown RBP6.29□□□□□ -1.4
USP47-204ENST00000525078 PAWRQ96IZ0 340 aaKnown RBP6.29□□□□□ -1.4
USP47-204ENST00000525078 ZC3H10Q96K80 434 aaKnown RBP6.29□□□□□ -1.4
USP47-204ENST00000525078 ZNF587Q96SQ5 575 aaPredicted RBP6.29□□□□□ -1.4
USP47-204ENST00000525078 SDF4Q9BRK5 362 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 CNPPD1Q9BV87 410 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 KCTD10Q9H3F6 313 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 POFUT1Q9H488 388 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 SUGCTQ9HAC7 445 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 OBP2BQ9NPH6 170 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 KCNH7Q9NS40 1196 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 OLA1Q9NTK5 396 aaKnown RBP6.29□□□□□ -1.4
USP47-204ENST00000525078 ANKEF1Q9NU02 776 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 NKIRAS2Q9NYR9 191 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 ITGB1BP2Q9UKP3 347 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 DAGLAQ9Y4D2 1042 aa6.29□□□□□ -1.4
USP47-204ENST00000525078 MAGED1Q9Y5V3 778 aaPredicted RBP6.29□□□□□ -1.4
USP47-204ENST00000525078 ST20-MTHFSA0A0A6YYL1 179 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 SSU72P8A0A1W2PR75 194 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 TCRBV5S4A2TA0A5A2 114 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 PRSS38A1L453 326 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 WTIPA6NIX2 430 aaPredicted RBP6.28□□□□□ -1.4
USP47-204ENST00000525078 NKRFO15226 690 aaKnown RBP eCLIP6.28□□□□□ -1.4
USP47-204ENST00000525078 PLOD3O60568 738 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 PLA2G6O60733 806 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 RPLP2P05387 115 aaKnown RBP6.28□□□□□ -1.4
USP47-204ENST00000525078 CKMT1AP12532 417 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 EEF1GP26641 437 aaKnown RBP6.28□□□□□ -1.4
USP47-204ENST00000525078 SLC7A1P30825 629 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 SLC35G1Q2M3R5 365 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 FIGNQ5HY92 759 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 CFAP58Q5T655 872 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 TIGD7Q6NT04 549 aaPredicted RBP6.28□□□□□ -1.4
USP47-204ENST00000525078 KLHDC10Q6PID8 442 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 ACAD11Q709F0 780 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 CEP68Q76N32 757 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 SV2AQ7L0J3 742 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 MIGA2Q7L4E1 593 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 RTN4RL1Q86UN2 441 aaPredicted RBP6.28□□□□□ -1.4
USP47-204ENST00000525078 PHYKPLQ8IUZ5 450 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 NLGN4XQ8N0W4 816 aa6.28□□□□□ -1.4
USP47-204ENST00000525078 CHCHD4Q8N4Q1 142 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms