RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PLEKHG4Q58EX7 1191 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 FAM26DQ5JW98 314 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 ATL3Q6DD88 541 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 TSHZ1Q6ZSZ6 1077 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 C1orf186Q6ZWK4 172 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 SPRED2Q7Z698 418 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 RTN4RL1Q86UN2 441 aaPredicted RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 ADGRA3Q8IWK6 1321 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 RNF169Q8NCN4 708 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 PSPC1Q8WXF1 523 aaKnown RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 LINC01599Q8WXQ3 324 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 LARP4BQ92615 738 aaKnown RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 DDX12PQ92771 950 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 REEP2Q9BRK0 252 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 SEZ6LQ9BYH1 1024 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 FGFBP2Q9BYJ0 223 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 IFIH1Q9BYX4 1025 aaKnown RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 INO80BQ9C086 356 aaPredicted RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 SCAND2PQ9GZW5 306 aaPredicted RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 NT5C3AQ9H0P0 336 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 TMX1Q9H3N1 280 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 IFT122Q9HBG6 1241 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 ERVK-5Q9HDB9 667 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 FAM13BQ9NYF5 915 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 KCNH3Q9ULD8 1083 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 CIZ1Q9ULV3 898 aaPredicted RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 ST3GAL5Q9UNP4 418 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 SCN10AQ9Y5Y9 1956 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 KIAA0100Q14667 2235 aaKnown RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 GOLGA6L4A6NEF3 574 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 MEIS3P2A8K0S8 358 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 TISP43B9A030 160 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 ENPP3O14638 875 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 ACTN4O43707 911 aaKnown RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 NR1I2O75469 434 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 FAM13AO94988 1023 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 ARHGEF15O94989 841 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 CSPG5O95196 566 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 CXCL10P02778 98 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 FGFR1P11362 822 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 HARSP12081 509 aaKnown RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 XRCC6P12956 609 aaKnown RBP eCLIP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 MUTP22033 750 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 CMA1P23946 247 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 SYKP43405 635 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 NPTX2P47972 431 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 WDR5P61964 334 aaKnown RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 MBTD1Q05BQ5 628 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 CUL4BQ13620 913 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 IKBKEQ14164 716 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 TMEM132AQ24JP5 1023 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 PAN2Q504Q3 1202 aaKnown RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 SEZ6Q53EL9 994 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 ODR4Q5SWX8 454 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 PRPF38BQ5VTL8 546 aaKnown RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 EEF1DP3Q658K8 133 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 ADALQ6DHV7 355 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 ISM2Q6H9L7 571 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 CNKSR3Q6P9H4 555 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 CCDC73Q6ZRK6 1079 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 SV2BQ7L1I2 683 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 CATSPER4Q7RTX7 472 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 RPAINQ86UA6 219 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 SFR1Q86XK3 245 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 RPUSD2Q8IZ73 545 aaKnown RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 TDHQ8IZJ6 230 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 MYOCDQ8IZQ8 938 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 NME8Q8N427 588 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 MYCT1Q8N699 235 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 GLIS3Q8NEA6 775 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 MCPH1Q8NEM0 835 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 DEPTORQ8TB45 409 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 TCP11Q8WWU5 503 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 MRPS27Q92552 414 aaKnown RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 SEPT8Q92599 483 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 LPPQ93052 612 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 DNAJC19Q96DA6 116 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 LRCH3Q96II8 777 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 FAM161BQ96MY7 647 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 ADAM2Q99965 735 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 JPH2Q9BR39 696 aaPredicted RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 APOL6Q9BWW8 343 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 EIF2AQ9BY44 585 aaKnown RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 GCOM2Q9BZD3 368 aaPredicted RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 CERS4Q9HA82 394 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 KMT5AQ9NQR1 393 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 HCSTQ9UBK5 93 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 PIN4Q9Y237 131 aaKnown RBP5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 HPSEQ9Y251 543 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 HES2Q9Y543 173 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 STK24Q9Y6E0 443 aa5.09□□□□□ -1.59
CHMP4A-202ENST00000524955 DENND3A2RUS2 1198 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 LCHNA4D1U4 455 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 K7ENM7 598 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 GPR182O15218 404 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 TSPAN1O60635 241 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 CAND2O75155 1236 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 TBCAO75347 108 aaKnown RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 ERLIN2O94905 339 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms