RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 NUF2Q9BZD4 464 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 MTMR12Q9C0I1 747 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 NEUROD4Q9HD90 331 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 C8orf4Q9NR00 106 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 ANO10Q9NW15 660 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.06□□□□□ -1.28
SDC2-208ENST00000523877 SUCLA2Q9P2R7 463 aaPredicted RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 ADGRE2Q9UHX3 823 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 CORO1CQ9ULV4 474 aaPredicted RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 EFR3BQ9Y2G0 817 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 CHTOPQ9Y3Y2 248 aaKnown RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 TDRD9Q8NDG6 1382 aaKnown RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 TOP2AP11388 1531 aaKnown RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 NUP160Q12769 1436 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 F8W810 466 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 SPECC1L-ADORA2AF8WAN1 911 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 L7N2F9 121 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 TNFRSF10AO00220 468 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 HDAC3O15379 428 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 PRPF3O43395 683 aaKnown RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 GFRA3O60609 400 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 TSPAN3O60637 253 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 TACC1O75410 805 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 SEC24DO94855 1032 aaPredicted RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 PGRP06401 933 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 APOA4P06727 396 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 LTA4HP09960 611 aaKnown RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 PHKG2P15735 406 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 TFEBP19484 476 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 JAK1P23458 1154 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 ACAT1P24752 427 aaKnown RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 POLR2BP30876 1174 aaKnown RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 TXLNAP40222 546 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 ECE1P42892 770 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 DGKGP49619 791 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 HADHBP55084 474 aaKnown RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 EIF4A1P60842 406 aaKnown RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 RACK1P63244 317 aaKnown RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 EIF4G2P78344 907 aaKnown RBP eCLIP7.05□□□□□ -1.28
SDC2-208ENST00000523877 GSTO1P78417 241 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 SGCGQ13326 291 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 TRPC3Q13507 836 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 BYSLQ13895 437 aaKnown RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 PRKG1Q13976 671 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 PDE3AQ14432 1141 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 MXD4Q14582 209 aaPredicted RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 KCNB1Q14721 858 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 ODF2Q5BJF6 829 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 FBXO48Q5FWF7 155 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 PPP6R3Q5H9R7 873 aaPredicted RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 KCNT1Q5JUK3 1230 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 KANK2Q63ZY3 851 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 RETSATQ6NUM9 610 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 OLFM4Q6UX06 510 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 BNC2Q6ZN30 1099 aaPredicted RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 LRP10Q7Z4F1 713 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 CNTROBQ8N137 903 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 CCDC63Q8NA47 563 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 PLBD2Q8NHP8 589 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 HERVK_113Q902F9 699 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 CLP1Q92989 425 aaKnown RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 HOOK2Q96ED9 719 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 NTPCRQ9BSD7 190 aaKnown RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 SLC26A6Q9BXS9 759 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 NYXQ9GZU5 481 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 SIL1Q9H173 461 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 HAUS4Q9H6D7 363 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 PRDM11Q9NQV5 511 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 NPDC1Q9NQX5 325 aaPredicted RBP7.05□□□□□ -1.28
SDC2-208ENST00000523877 DMTF1Q9Y222 760 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 PCDHGB7Q9Y5F8 929 aa7.05□□□□□ -1.28
SDC2-208ENST00000523877 TTC21BQ7Z4L5 1316 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 MAGEB16A2A368 324 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 TRIM43BA6NCK2 446 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 C16orf96A6NNT2 1141 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 KRIT1O00522 736 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 APAF1O14727 1248 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 ST8SIA5O15466 376 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 MTSS1O43312 755 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 ICMTO60725 284 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 SOCS5O75159 536 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 HSPA4LO95757 839 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 HLA-DRAP01903 254 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 POLR3DP05423 398 aaPredicted RBP7.04□□□□□ -1.28
SDC2-208ENST00000523877 CTSHP09668 335 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 PRKAR1AP10644 381 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 HSD3B1P14060 373 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 SSTR3P32745 418 aaPredicted RBP7.04□□□□□ -1.28
SDC2-208ENST00000523877 LONP1P36776 959 aaKnown RBP7.04□□□□□ -1.28
SDC2-208ENST00000523877 TKTL1P51854 596 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 GPR85P60893 370 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 VBP1P61758 197 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 CSNK2BP67870 215 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 KRT85P78386 507 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 APOBRQ0VD83 1088 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 ITGB3BPQ13352 177 aaPredicted RBP7.04□□□□□ -1.28
SDC2-208ENST00000523877 ZNF211Q13398 564 aaPredicted RBP7.04□□□□□ -1.28
SDC2-208ENST00000523877 IDI1Q13907 227 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 HIC1Q14526 733 aa7.04□□□□□ -1.28
SDC2-208ENST00000523877 LAPTM4AQ15012 233 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 700 ms