RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 FAM189BP81408 668 aa10.61□□□□□ -0.71
PABPC1-222ENST00000523555 CAPSQ13938 189 aa10.61□□□□□ -0.71
PABPC1-222ENST00000523555 LONRF3Q496Y0 759 aa10.61□□□□□ -0.71
PABPC1-222ENST00000523555 ZNF410Q86VK4 478 aa10.61□□□□□ -0.71
PABPC1-222ENST00000523555 IGSF22Q8N9C0 903 aa10.61□□□□□ -0.71
PABPC1-222ENST00000523555 PSPC1Q8WXF1 523 aaKnown RBP10.61□□□□□ -0.71
PABPC1-222ENST00000523555 CLP1Q92989 425 aaKnown RBP10.61□□□□□ -0.71
PABPC1-222ENST00000523555 MMTAG2Q9BU76 263 aaKnown RBP10.61□□□□□ -0.71
PABPC1-222ENST00000523555 POLR3CQ9BUI4 534 aaPredicted RBP10.61□□□□□ -0.71
PABPC1-222ENST00000523555 GCOM2Q9BZD3 368 aaPredicted RBP10.61□□□□□ -0.71
PABPC1-222ENST00000523555 TUFT1Q9NNX1 390 aa10.61□□□□□ -0.71
PABPC1-222ENST00000523555 C1orf112Q9NSG2 853 aa10.61□□□□□ -0.71
PABPC1-222ENST00000523555 ANKEF1Q9NU02 776 aa10.61□□□□□ -0.71
PABPC1-222ENST00000523555 LRFN2Q9ULH4 789 aa10.61□□□□□ -0.71
PABPC1-222ENST00000523555 KIF3AQ9Y496 699 aa10.61□□□□□ -0.71
PABPC1-222ENST00000523555 PCDHB7Q9Y5E2 793 aa10.61□□□□□ -0.71
PABPC1-222ENST00000523555 C5orf42Q9H799 3197 aa10.61□□□□□ -0.71
PABPC1-222ENST00000523555 TRIP11Q15643 1979 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 VPS37CA5D8V6 355 aaPredicted RBP10.6□□□□□ -0.71
PABPC1-222ENST00000523555 TBKBP1A7MCY6 615 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 C5orf67F2Z3F1 127 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 H3BNC9 293 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
PABPC1-222ENST00000523555 GRM6O15303 877 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 STAG3L1P0CL83 205 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 GLRA2P23416 452 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 DNAJB1P25685 340 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 ARL2P36404 184 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 ATP2C1P98194 919 aaPredicted RBP10.6□□□□□ -0.71
PABPC1-222ENST00000523555 GRIN1Q05586 938 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 GPM6BQ13491 265 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 CLLU1OSQ5K130 101 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 ODR4Q5SWX8 454 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 FAM173BQ6P4H8 233 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 LRRC55Q6ZSA7 311 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 KCNK18Q7Z418 384 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 ZNF598Q86UK7 904 aaKnown RBP10.6□□□□□ -0.71
PABPC1-222ENST00000523555 ECHDC2Q86YB7 292 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 CMTR2Q8IYT2 770 aaKnown RBP10.6□□□□□ -0.71
PABPC1-222ENST00000523555 PIAS4Q8N2W9 510 aaPredicted RBP10.6□□□□□ -0.71
PABPC1-222ENST00000523555 RNF149Q8NC42 400 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 BSNDQ8WZ55 320 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 LPPQ93052 612 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 CASD1Q96PB1 797 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 JPH2Q9BR39 696 aaPredicted RBP10.6□□□□□ -0.71
PABPC1-222ENST00000523555 CWH43Q9H720 699 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 ATP6V0A4Q9HBG4 840 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 TMEM161AQ9NX61 479 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 LRWD1Q9UFC0 647 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 PIN4Q9Y237 131 aaKnown RBP10.6□□□□□ -0.71
PABPC1-222ENST00000523555 PPME1Q9Y570 386 aa10.6□□□□□ -0.71
PABPC1-222ENST00000523555 E9PMD0 336 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 GTPBP6O43824 516 aaPredicted RBP10.59□□□□□ -0.71
PABPC1-222ENST00000523555 DGAT1O75907 488 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 EDN1P05305 212 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 ZSCAN20P17040 1043 aaPredicted RBP10.59□□□□□ -0.71
PABPC1-222ENST00000523555 SYT1P21579 422 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 HOXA11P31270 313 aaPredicted RBP10.59□□□□□ -0.71
PABPC1-222ENST00000523555 BMPR1AP36894 532 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 CCT6AP40227 531 aaKnown RBP10.59□□□□□ -0.71
PABPC1-222ENST00000523555 PBX3P40426 434 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 TFF2Q03403 129 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 CAMK1Q14012 370 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 RILPL1Q5EBL4 403 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 UBXN11Q5T124 520 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 CATSPER4Q7RTX7 472 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 RNF169Q8NCN4 708 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 SNX29Q8TEQ0 813 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 LRRC15Q8TF66 581 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 TCP11Q8WWU5 503 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 SAMD11Q96NU1 681 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 PNMA5Q96PV4 448 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 POLR3FQ9H1D9 316 aaPredicted RBP10.59□□□□□ -0.71
PABPC1-222ENST00000523555 ELAC1Q9H777 363 aaKnown RBP10.59□□□□□ -0.71
PABPC1-222ENST00000523555 ALG13Q9NP73 1137 aaKnown RBP10.59□□□□□ -0.71
PABPC1-222ENST00000523555 AGPAT5Q9NUQ2 364 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 DDX19AQ9NUU7 478 aaKnown RBP10.59□□□□□ -0.71
PABPC1-222ENST00000523555 TYW1Q9NV66 732 aaKnown RBP10.59□□□□□ -0.71
PABPC1-222ENST00000523555 DBR1Q9UK59 544 aaKnown RBP10.59□□□□□ -0.71
PABPC1-222ENST00000523555 KIAA1024Q9UPX6 916 aa10.59□□□□□ -0.71
PABPC1-222ENST00000523555 A0A0U1RQF3 1178 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 VWA3AA6NCI4 1184 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 TTLL13PA6NNM8 815 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 B4GALT5O43286 388 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 GAS2O43903 313 aaKnown RBP10.58□□□□□ -0.72
PABPC1-222ENST00000523555 TSPAN1O60635 241 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 ITGB1P05556 798 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 XRCC6P12956 609 aaKnown RBP eCLIP10.58□□□□□ -0.72
PABPC1-222ENST00000523555 SFPQP23246 707 aaKnown RBP eCLIP10.58□□□□□ -0.72
PABPC1-222ENST00000523555 PRPHP41219 470 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 PHKA2P46019 1235 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 AFF1P51825 1210 aaKnown RBP10.58□□□□□ -0.72
PABPC1-222ENST00000523555 PTENP60484 403 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 MBTD1Q05BQ5 628 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 RESTQ13127 1097 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 PDIA5Q14554 519 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 AMHR2Q16671 573 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 HAUS3Q68CZ6 603 aa10.58□□□□□ -0.72
PABPC1-222ENST00000523555 TWF2Q6IBS0 349 aaKnown RBP10.58□□□□□ -0.72
PABPC1-222ENST00000523555 PADI6Q6TGC4 694 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms