RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 CSF2RBP32927 897 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 KCNQ1P51787 676 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 SCAND1P57086 179 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 ZXDAP98168 799 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 FSCN1Q16658 493 aaKnown RBP6.34□□□□□ -1.39
PCM1-219ENST00000523540 DGKDQ16760 1214 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 INAVAQ3KP66 663 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 BRDTQ58F21 947 aaPredicted RBP6.34□□□□□ -1.39
PCM1-219ENST00000523540 CT83Q5H943 113 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 PITRM1Q5JRX3 1037 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 UBXN11Q5T124 520 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 CBARPQ8N350 705 aaPredicted RBP6.34□□□□□ -1.39
PCM1-219ENST00000523540 STAG1Q8WVM7 1258 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 FERMT2Q96AC1 680 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 ACAP3Q96P50 834 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 CCDC8Q9H0W5 538 aaPredicted RBP6.34□□□□□ -1.39
PCM1-219ENST00000523540 PRDM12Q9H4Q4 367 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 MAGEL2Q9UJ55 1249 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 SLC4A7Q9Y6M7 1214 aa6.34□□□□□ -1.39
PCM1-219ENST00000523540 PMS2P1A4D2B8 440 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 MAFGO15525 162 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 B4GALT3O60512 393 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 PCDH8O95206 1070 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 ENPP1P22413 925 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 GPR3P46089 330 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 KLF1Q13351 362 aaPredicted RBP6.33□□□□□ -1.4
PCM1-219ENST00000523540 USP10Q14694 798 aaKnown RBP6.33□□□□□ -1.4
PCM1-219ENST00000523540 ZMAT1Q5H9K5 638 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 SYDE2Q5VT97 1194 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 LARP4Q71RC2 724 aaKnown RBP eCLIP6.33□□□□□ -1.41e-9■■□□□ 11.8
PCM1-219ENST00000523540 RALYLQ86SE5 291 aaKnown RBP6.33□□□□□ -1.4
PCM1-219ENST00000523540 FERMT3Q86UX7 667 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 SLC41A1Q8IVJ1 513 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 TTC9BQ8N6N2 239 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 CARD11Q9BXL7 1154 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 KRTAP3-1Q9BYR8 98 aa6.33□□□□□ -1.4
PCM1-219ENST00000523540 TYW1Q9NV66 732 aaKnown RBP6.33□□□□□ -1.4
PCM1-219ENST00000523540 DDX56Q9NY93 547 aaKnown RBP6.33□□□□□ -1.4
PCM1-219ENST00000523540 A0A0A6YYK5 440 aaPredicted RBP6.32□□□□□ -1.4
PCM1-219ENST00000523540 ST20-MTHFSA0A0A6YYL1 179 aa6.32□□□□□ -1.4
PCM1-219ENST00000523540 HMGCRP04035 888 aa6.32□□□□□ -1.4
PCM1-219ENST00000523540 ZNF888P0CJ79 500 aaPredicted RBP6.32□□□□□ -1.4
PCM1-219ENST00000523540 STAT5BP51692 787 aa6.32□□□□□ -1.4
PCM1-219ENST00000523540 SESN2P58004 480 aaPredicted RBP6.32□□□□□ -1.4
PCM1-219ENST00000523540 ITKQ08881 620 aa6.32□□□□□ -1.4
PCM1-219ENST00000523540 NFYCQ13952 458 aa6.32□□□□□ -1.4
PCM1-219ENST00000523540 TRIM25Q14258 630 aaKnown RBP6.32□□□□□ -1.4
PCM1-219ENST00000523540 CCDC62Q6P9F0 684 aa6.32□□□□□ -1.4
PCM1-219ENST00000523540 LPPQ93052 612 aa6.32□□□□□ -1.4
PCM1-219ENST00000523540 NKD2Q969F2 451 aaPredicted RBP6.32□□□□□ -1.4
PCM1-219ENST00000523540 EAF2Q96CJ1 260 aaPredicted RBP6.32□□□□□ -1.4
PCM1-219ENST00000523540 RBM15Q96T37 977 aaKnown RBP eCLIP6.32□□□□□ -1.4
PCM1-219ENST00000523540 NOL10Q9BSC4 688 aaKnown RBP6.32□□□□□ -1.4
PCM1-219ENST00000523540 SOX7Q9BT81 388 aa6.32□□□□□ -1.4
PCM1-219ENST00000523540 SAE1Q9UBE0 346 aaPredicted RBP6.32□□□□□ -1.4
PCM1-219ENST00000523540 TRHDEQ9UKU6 1024 aa6.32□□□□□ -1.4
PCM1-219ENST00000523540 PTPN22Q9Y2R2 807 aa6.32□□□□□ -1.4
PCM1-219ENST00000523540 ZDHHC9Q9Y397 364 aa6.32□□□□□ -1.4
PCM1-219ENST00000523540 C1QTNF3-AMACRE9PGA6 284 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 GABRDO14764 452 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 LAMTOR5O43504 91 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 ITGB3P05106 788 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 LPLP06858 475 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 UGT8Q16880 541 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 GPR155Q7Z3F1 870 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 KBTBD2Q8IY47 623 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 TGFBRAP1Q8WUH2 860 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 RSAD2Q8WXG1 361 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 MTMR8Q96EF0 704 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 DYDC2Q96IM9 177 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 ASPSCR1Q9BZE9 553 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 PRSS50Q9UI38 385 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 PCDHB6Q9Y5E3 794 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 DUSP10Q9Y6W6 482 aa6.31□□□□□ -1.4
PCM1-219ENST00000523540 WASHC2AQ641Q2 1341 aa6.3□□□□□ -1.4
PCM1-219ENST00000523540 PDGFRBP09619 1106 aa6.3□□□□□ -1.4
PCM1-219ENST00000523540 EXOSC10Q01780 885 aaKnown RBP6.3□□□□□ -1.4
PCM1-219ENST00000523540 PCOLCEQ15113 449 aa6.3□□□□□ -1.4
PCM1-219ENST00000523540 SLFN13Q68D06 897 aa6.3□□□□□ -1.4
PCM1-219ENST00000523540 KCNK18Q7Z418 384 aa6.3□□□□□ -1.4
PCM1-219ENST00000523540 ANKRD13AQ8IZ07 590 aa6.3□□□□□ -1.4
PCM1-219ENST00000523540 CDYL2Q8N8U2 506 aa6.3□□□□□ -1.4
PCM1-219ENST00000523540 PPP1R14CQ8TAE6 165 aa6.3□□□□□ -1.4
PCM1-219ENST00000523540 GAB3Q8WWW8 586 aa6.3□□□□□ -1.4
PCM1-219ENST00000523540 KCTD10Q9H3F6 313 aa6.3□□□□□ -1.4
PCM1-219ENST00000523540 POLR3BQ9NW08 1133 aaPredicted RBP6.3□□□□□ -1.4
PCM1-219ENST00000523540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.3□□□□□ -1.4
PCM1-219ENST00000523540 USP18Q9UMW8 372 aa6.3□□□□□ -1.4
PCM1-219ENST00000523540 INVSQ9Y283 1065 aa6.3□□□□□ -1.4
PCM1-219ENST00000523540 TRIM75PA6NK02 468 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 H2AFYO75367 372 aaKnown RBP6.29□□□□□ -1.4
PCM1-219ENST00000523540 CNR2P34972 360 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 IARSP41252 1262 aaKnown RBP6.29□□□□□ -1.4
PCM1-219ENST00000523540 GPR15P49685 360 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 MRE11P49959 708 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 RRADP55042 308 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 LGALS4P56470 323 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 PPP2CBP62714 309 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 PPP2CAP67775 309 aa6.29□□□□□ -1.4
PCM1-219ENST00000523540 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms