RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 SNUPNO95149 360 aaKnown RBP9.71□□□□□ -0.86
CSMD1-212ENST00000523387 GNAT1P11488 350 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 KRT5P13647 590 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 CA4P22748 312 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 SOX5P35711 763 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 CDK8P49336 464 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 FXR2P51116 673 aaKnown RBP eCLIP9.71□□□□□ -0.86
CSMD1-212ENST00000523387 NT5DC3Q86UY8 548 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 SMC6Q96SB8 1091 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 SETDB2Q96T68 719 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 BHMT2Q9H2M3 363 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 DLGAP2Q9P1A6 1054 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 STOML1Q9UBI4 398 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 WDR91A4D1P6 747 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 CYTH3O43739 400 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 TOM1O60784 492 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 AP1G2O75843 785 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 FTLP02792 175 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 PON1P27169 355 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 ERFEQ4G0M1 354 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 CCDC174Q6PII3 467 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 NSMFQ6X4W1 530 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 RNF207Q6ZRF8 634 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 C1orf54Q8WWF1 131 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 USTQ9Y2C2 406 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 ALG6Q9Y672 507 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 FLT1P17948 1338 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 EXOC1LA0A1B0GW35 172 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 SPAG7O75391 227 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 CIB2O75838 187 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 DCTN3O75935 186 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 BAG2O95816 211 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 BTDP43251 543 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 CRKLP46109 303 aaKnown RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 NCALDP61601 193 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 ASTE1Q2TB18 679 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 EDRF1Q3B7T1 1238 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 SBK1Q52WX2 424 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 THEMIS2Q5TEJ8 643 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 PHLDB3Q6NSJ2 640 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 FAM178BQ8IXR5 827 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 SLFN12Q8IYM2 578 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 ZNF34Q8IZ26 560 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 PPM1KQ8N3J5 372 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 TEX9Q8N6V9 391 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 PDCD7Q8N8D1 485 aaKnown RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 PARD3BQ8TEW8 1205 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 GRK7Q8WTQ7 553 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 CEP95Q96GE4 821 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 MMTAG2Q9BU76 263 aaKnown RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 UBE2TQ9NPD8 197 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 BTG4Q9NY30 223 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 CHORDC1Q9UHD1 332 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 PNMA3Q9UL41 463 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 PPP1R9AQ9ULJ8 1098 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 RABGAP1Q9Y3P9 1069 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 A8MUI8 341 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 KRT16P08779 473 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 PAEPP09466 180 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 TMEM253P0C7T8 217 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 TRIM49P0CI25 452 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 TRIM49CP0CI26 452 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 DLATP10515 647 aaKnown RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 TARSP26639 723 aaKnown RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 ANXA13P27216 316 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 MRPS35P82673 323 aaKnown RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 MKRN3Q13064 507 aaKnown RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 DPP8Q6V1X1 898 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 RPUSD2Q8IZ73 545 aaKnown RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 ARHGAP24Q8N264 748 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 DNAJC9Q8WXX5 260 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 MXD3Q9BW11 206 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 TMX4Q9H1E5 349 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 DHX36Q9H2U1 1008 aaKnown RBP9.7□□□□□ -0.86
CSMD1-212ENST00000523387 TRIM33Q9UPN9 1127 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 SPEF2Q9C093 1822 aa9.7□□□□□ -0.86
CSMD1-212ENST00000523387 ZNF804BA4D1E1 1349 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 C6orf229H3BNL8 230 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 NOL4O94818 638 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 KYNUQ16719 465 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 USH1GQ495M9 461 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 ASPRV1Q53RT3 343 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 AGGF1Q8N302 714 aaeCLIP9.69□□□□□ -0.863e-8■■■■■ 37.8
CSMD1-212ENST00000523387 MAIP1Q8WWC4 291 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 THAP2Q9H0W7 228 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 PAPOLBQ9NRJ5 636 aaKnown RBP9.69□□□□□ -0.86
CSMD1-212ENST00000523387 BSDC1Q9NW68 430 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-212ENST00000523387 PITPNM2Q9BZ72 1349 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 LMO7Q8WWI1 1683 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 LMTK3Q96Q04 1460 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 DDX3XO00571 662 aaKnown RBP eCLIP9.69□□□□□ -0.86
CSMD1-212ENST00000523387 HLA-DOAP06340 250 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 RIPK1Q13546 671 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 RCN2Q14257 317 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 SPARCL1Q14515 664 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 TNIP1Q15025 636 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 TRMT10CQ7L0Y3 403 aaKnown RBP9.69□□□□□ -0.86
CSMD1-212ENST00000523387 FAM228AQ86W67 206 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 SCFD1Q8WVM8 642 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 CELF1Q92879 486 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms