RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 TMEM117Q9H0C3 514 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 CWH43Q9H720 699 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 ELAC1Q9H777 363 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 BRMS1Q9HCU9 246 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 RGL1Q9NZL6 768 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 PUF60Q9UHX1 559 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 CD207Q9UJ71 328 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 STK36Q9NRP7 1315 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 HOXA2O43364 376 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 TBX10O75333 385 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 MAFO75444 373 aaPredicted RBP11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 LARGE1O95461 756 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 SEC24BO95487 1268 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 P4HBP07237 508 aaKnown RBP11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 FDPSP14324 419 aaKnown RBP11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 LAG3P18627 525 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 RBM10P98175 930 aaKnown RBP11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 CDC42EP1Q00587 391 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 CYP4A11Q02928 519 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 TRIM29Q14134 588 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 CTTNQ14247 550 aaKnown RBP11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 XKR9Q5GH70 373 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 PLPP4Q5VZY2 271 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 TWF2Q6IBS0 349 aaKnown RBP11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 PPP4R3AQ6IN85 833 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 LLGL2Q6P1M3 1020 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 B3GNT9Q6UX72 402 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 FAM43BQ6ZT52 329 aaPredicted RBP11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 CATSPER4Q7RTX7 472 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 TPH2Q8IWU9 490 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 FAM177A1Q8N128 213 aaPredicted RBP11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 ZNF710Q8N1W2 664 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 HAS1Q92839 578 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 LPPQ93052 612 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 DYDC2Q96IM9 177 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 ZNF558Q96NG5 402 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 NAP1L4Q99733 375 aaKnown RBP11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 APOL5Q9BWW9 433 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 ENTPD7Q9NQZ7 604 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 CYP26B1Q9NR63 512 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 TLR9Q9NR96 1032 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 DACT1Q9NYF0 836 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 VAV3Q9UKW4 847 aa11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 BARX2Q9UMQ3 279 aaPredicted RBP11.47□□□□□ -0.57
CTNNA1-235ENST00000522730 TRIOO75962 3097 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 A0A087WWV3 80 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 A0A0U1RQF3 1178 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 BTBD18B2RXH4 712 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 NT5C1B-RDH14C9J2C7 533 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 PI4K2BG5E9Z4 385 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 ZBTB39O15060 712 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 MBTPS2O43462 519 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 JAK2O60674 1132 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 DKC1O60832 514 aaKnown RBP eCLIP11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 GCFC2P16383 781 aaKnown RBP11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 SFPQP23246 707 aaKnown RBP eCLIP11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 POLGP54098 1239 aaPredicted RBP11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 GUCY1B3Q02153 619 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 KRT17Q04695 432 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 ZP2Q05996 745 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 PPP2R5CQ13362 524 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 COL19A1Q14993 1142 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 EPHA7Q15375 998 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 CLLU1OSQ5K130 101 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 KCNT2Q6UVM3 1135 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 OTUD6AQ7L8S5 288 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 TMC7Q7Z402 723 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 EFHBQ8N7U6 833 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 PRPF31Q8WWY3 499 aaKnown RBP11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 SLC7A3Q8WY07 619 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 GTF3C6Q969F1 213 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 CEP89Q96ST8 783 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 JPH2Q9BR39 696 aaPredicted RBP11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 INO80BQ9C086 356 aaPredicted RBP11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 KCNMB3Q9NPA1 279 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 RNF19AQ9NV58 838 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 SPG21Q9NZD8 308 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 CLEC1BQ9P126 229 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 WRAP73Q9P2S5 460 aaPredicted RBP11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 PIN4Q9Y237 131 aaKnown RBP11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 INPP5FQ9Y2H2 1132 aa11.46□□□□□ -0.57
CTNNA1-235ENST00000522730 RALGAPA2Q2PPJ7 1873 aa11.46□□□□□ -0.58
CTNNA1-235ENST00000522730 COL4A6Q14031 1691 aa11.46□□□□□ -0.58
CTNNA1-235ENST00000522730 IGKV6-21A0A0C4DH24 114 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 EOMESO95936 686 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 ALADP13716 330 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 YWHABP31946 246 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 TXKP42681 527 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 ALDH7A1P49419 539 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 UBE3AQ05086 875 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 RNASELQ05823 741 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 CSPP1Q1MSJ5 1256 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 ADHFE1Q8IWW8 467 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 LRRC43Q8N309 656 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 TMEM87AQ8NBN3 555 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 MRPS27Q92552 414 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 TCF25Q9BQ70 676 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 LXNQ9BS40 222 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 GBP3Q9H0R5 595 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 CHST12Q9NRB3 414 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms