RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 CDR1P51861 262 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 EPHB3P54753 998 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 PHC1P78364 1004 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 SRSF3P84103 164 aaKnown RBP3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 SRSF2Q01130 221 aaKnown RBP3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 PFKPQ01813 784 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 SLC6A3Q01959 620 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 MYBPC3Q14896 1274 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 EPHA7Q15375 998 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 CLUL1Q15846 466 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 TOR2AQ5JU69 321 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 PRAMEF9Q5VWM5 478 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 CCDC62Q6P9F0 684 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 ETV3LQ6ZN32 361 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 RASSF3Q86WH2 238 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 CXorf67Q86X51 503 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 MIB1Q86YT6 1006 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 WDR75Q8IWA0 830 aaKnown RBP3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 C1orf162Q8NEQ5 155 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 TTLL11Q8NHH1 800 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 LMBR1Q8WVP7 490 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 EAF2Q96CJ1 260 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 NOX5Q96PH1 765 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 SLC2A13Q96QE2 648 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 TUBGCP5Q96RT8 1024 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 AMNQ9BXJ7 453 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 QRSL1Q9H0R6 528 aaKnown RBP3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 SLC12A5Q9H2X9 1139 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 CNTD2Q9H8S5 307 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 C14orf93Q9H972 538 aaKnown RBP3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 CCM2LQ9NUG4 571 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 ZIM2Q9NZV7 527 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 ARHGAP28Q9P2N2 729 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 IP6K2Q9UHH9 426 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 MAGEL2Q9UJ55 1249 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 NUB1Q9Y5A7 615 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 ASXL1Q8IXJ9 1541 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 EIF3AQ14152 1382 aaKnown RBP3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 KTN1Q86UP2 1357 aaKnown RBP3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 IFT172Q9UG01 1749 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 A2ML1A8K2U0 1454 aa3.47□□□□□ -1.85
CKS1BP7-201ENST00000522230 PIK3C2GO75747 1445 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 ARHGAP31Q2M1Z3 1444 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 AGLP35573 1532 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 TMEM131LA2VDJ0 1609 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 UBA6A0AVT1 1052 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 PRSS38A1L453 326 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 ZNF839A8K0R7 811 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 GOLGA6L22H0YM25 854 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 K7ESF4 209 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 XPOTO43592 962 aaKnown RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 TSPAN6O43657 245 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 PRPF6O94906 941 aaKnown RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 CELA3BP08861 270 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 PTGS1P23219 599 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 MANFP55145 182 aaKnown RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 CCT2P78371 535 aaKnown RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 SLC9A5Q14940 896 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 RTP5Q14D33 572 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 ACAP2Q15057 778 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 PPP2R5AQ15172 486 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 NFE2Q16621 373 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 MLANAQ16655 118 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 SKIDA1Q1XH10 827 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 PITRM1Q5JRX3 1037 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 NBPF11Q86T75 865 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 LDHDQ86WU2 507 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 IRF2BP1Q8IU81 584 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 CCDC146Q8IYE0 955 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 Q8N3U1 123 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 C7orf31Q8N865 590 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 SMARCC2Q8TAQ2 1214 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 CHMP4CQ96CF2 233 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 FAXDC2Q96IV6 333 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 TACO1Q9BSH4 297 aaKnown RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 MCOLN1Q9GZU1 580 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 ZNF552Q9H707 407 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 SLC52A1Q9NWF4 448 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 MKS1Q9NXB0 559 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 TCEAL9Q9UHQ7 104 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 MBD1Q9UIS9 605 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 LUC7L2Q9Y383 392 aaKnown RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 KNSTRNQ9Y448 316 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 METP08581 1390 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 ZC3H13Q5T200 1668 aaKnown RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 RIMS1Q86UR5 1692 aaKnown RBP3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 QRICH2Q9H0J4 1663 aa3.46□□□□□ -1.86
CKS1BP7-201ENST00000522230 RPGRIP1LQ68CZ1 1315 aa3.45□□□□□ -1.86
CKS1BP7-201ENST00000522230 NSD3Q9BZ95 1437 aa3.45□□□□□ -1.86
CKS1BP7-201ENST00000522230 LAMC1P11047 1609 aa3.45□□□□□ -1.86
CKS1BP7-201ENST00000522230 POLR1AO95602 1720 aaPredicted RBP3.45□□□□□ -1.86
CKS1BP7-201ENST00000522230 IL18BPO95998 194 aa3.45□□□□□ -1.86
CKS1BP7-201ENST00000522230 PRLP01236 227 aa3.45□□□□□ -1.86
CKS1BP7-201ENST00000522230 ITGB5P18084 799 aa3.45□□□□□ -1.86
CKS1BP7-201ENST00000522230 CCND1P24385 295 aa3.45□□□□□ -1.86
CKS1BP7-201ENST00000522230 FNTBP49356 437 aa3.45□□□□□ -1.86
CKS1BP7-201ENST00000522230 EPHB1P54762 984 aa3.45□□□□□ -1.86
CKS1BP7-201ENST00000522230 HERVK_113P62684 666 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms