RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 STAG3L1P0CL83 205 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 SFPQP23246 707 aaKnown RBP eCLIP9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 SARSP49591 514 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 HTRA4P83105 476 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 CAPSQ13938 189 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 BTG3Q14201 252 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 LONRF3Q496Y0 759 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 FAM102BQ5T8I3 360 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 TWF2Q6IBS0 349 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 NPAS4Q8IUM7 802 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 EXOC8Q8IYI6 725 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 IGSF22Q8N9C0 903 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 MAFAQ8NHW3 353 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 ASAP3Q8TDY4 903 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 TGS1Q96RS0 853 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 C17orf80Q9BSJ5 609 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 BHMT2Q9H2M3 363 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 POLD4Q9HCU8 107 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 PCDHB7Q9Y5E2 793 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 FNDC1Q4ZHG4 1894 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 COL4A6Q14031 1691 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 E9PMD0 336 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 INO80B-WBP1J3KQ70 363 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 ERLIN2O94905 339 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 BMP15O95972 392 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 FGFR1P11362 822 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 LIG1P18858 919 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 MARCKSP29966 332 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 CTNNB1P35222 781 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 PHKA2P46019 1235 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 GRIN1Q05586 938 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 TFDP1Q14186 410 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 ADGRE1Q14246 886 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 PDIA5Q14554 519 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 CCDC85BQ15834 202 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 SPOUT1Q5T280 376 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 PADI6Q6TGC4 694 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 KCNK18Q7Z418 384 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 CABP7Q86V35 215 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 ZNF710Q8N1W2 664 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 FIBCD1Q8N539 461 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 FBXO22Q8NEZ5 403 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 INO80BQ9C086 356 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 MINDY3Q9H8M7 445 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 IFT122Q9HBG6 1241 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 RGS18Q9NS28 235 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 C1orf112Q9NSG2 853 aa9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 DBR1Q9UK59 544 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-231ENST00000521941 TBKBP1A7MCY6 615 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 C9IYK1 514 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 GTPBP6O43824 516 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 DGKIO75912 1065 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 GLRA2P23416 452 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 CDC42EP1Q00587 391 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 RAD51AP2Q09MP3 1159 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 GRB10Q13322 594 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 DHX8Q14562 1220 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 DSC3Q14574 896 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 MXD4Q14582 209 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 TMEM132AQ24JP5 1023 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 SPECC1Q5M775 1068 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 ARL6IP4Q66PJ3 421 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 SLC24A5Q71RS6 500 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 SRGAP1Q7Z6B7 1085 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 ECHDC2Q86YB7 292 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 MCPH1Q8NEM0 835 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 SP7Q8TDD2 431 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 CPB2Q96IY4 423 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 USP28Q96RU2 1077 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 MMTAG2Q9BU76 263 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 HCSTQ9UBK5 93 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 DAXXQ9UER7 740 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 DNM3Q9UQ16 869 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 STK24Q9Y6E0 443 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 MRPL42Q9Y6G3 142 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 MYH11P35749 1972 aa9.28□□□□□ -0.92
CTNNA1-231ENST00000521941 ASAP2O43150 1006 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 EYA4O95677 639 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 XRCC6P12956 609 aaKnown RBP eCLIP9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 MUTP22033 750 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 ARL2P36404 184 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 UBA7P41226 1012 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 ERVK-21P61565 698 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 PKP1Q13835 747 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 KARSQ15046 597 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 STK38Q15208 465 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 SKIV2LQ15477 1246 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 EPC2Q52LR7 807 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 CDR2LQ86X02 465 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 ZBTB8OSQ8IWT0 167 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 TMEM192Q8IY95 271 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 ABI1Q8IZP0 508 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 BSNDQ8WZ55 320 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 LPPQ93052 612 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 ZNF689Q96CS4 500 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 CALML4Q96GE6 196 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 CLIC6Q96NY7 704 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 PNMA5Q96PV4 448 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 KIFC3Q9BVG8 833 aa9.27□□□□□ -0.93
CTNNA1-231ENST00000521941 RUSC1Q9BVN2 902 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms