RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 PTPN21Q16825 1174 aa24.34■■□□□ 1.49
PTP4A3-204ENST00000521578 ZNF484Q5JVG2 852 aa24.34■■□□□ 1.49
PTP4A3-204ENST00000521578 GDF6Q6KF10 455 aaPredicted RBP24.34■■□□□ 1.49
PTP4A3-204ENST00000521578 TC2NQ8N9U0 490 aa24.34■■□□□ 1.49
PTP4A3-204ENST00000521578 BHMT2Q9H2M3 363 aa24.34■■□□□ 1.49
PTP4A3-204ENST00000521578 ANKEF1Q9NU02 776 aa24.34■■□□□ 1.49
PTP4A3-204ENST00000521578 RIOK3O14730 519 aaKnown RBP24.33■■□□□ 1.49
PTP4A3-204ENST00000521578 TEX33O43247 280 aa24.33■■□□□ 1.49
PTP4A3-204ENST00000521578 RARRES1P49788 294 aa24.33■■□□□ 1.49
PTP4A3-204ENST00000521578 STIM1Q13586 685 aa24.33■■□□□ 1.49
PTP4A3-204ENST00000521578 TARBP2Q15633 366 aaKnown RBP24.33■■□□□ 1.49
PTP4A3-204ENST00000521578 DHTKD1Q96HY7 919 aaPredicted RBP24.33■■□□□ 1.49
PTP4A3-204ENST00000521578 PPP1R13BQ96KQ4 1090 aa24.33■■□□□ 1.49
PTP4A3-204ENST00000521578 TUBB4AP04350 444 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 SSBP05455 408 aaKnown RBP eCLIP24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 PPP1R2P41236 205 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 CDK7P50613 346 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 KRT31Q15323 416 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 COBLL1Q53SF7 1204 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 MARCH8Q5T0T0 291 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 SESTD1Q86VW0 696 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 LRRC27Q9C0I9 530 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 BMP2KQ9NSY1 1161 aaPredicted RBP24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 BLOC1S4Q9NUP1 217 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 TRMT13Q9NUP7 481 aaKnown RBP24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 DBR1Q9UK59 544 aaKnown RBP24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 RRN3P2A6NIE6 340 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 ARHGAP6O43182 974 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 STX10O60499 249 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 EYA4O95677 639 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 LRRC26Q2I0M4 334 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 TCP11X2Q5H9J9 407 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 SV2BQ7L1I2 683 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 TRPV6Q9H1D0 765 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 ITIH6Q6UXX5 1313 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 COL1A2P08123 1366 aa24.32■■□□□ 1.48
PTP4A3-204ENST00000521578 ARHGEF35A5YM69 484 aa24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 PSMA7O14818 248 aa24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 TREHO43280 583 aa24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 PQBP1O60828 265 aaKnown RBP24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 GNAT1P11488 350 aa24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 HOXC8P31273 242 aa24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 PTPN11Q06124 597 aaPredicted RBP24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 PTGISQ16647 500 aa24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 TRIM60Q495X7 471 aa24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 CNNM4Q6P4Q7 775 aa24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 ANKRD20A12PQ8NF67 263 aa24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 RAD54LQ92698 747 aa24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 CEP89Q96ST8 783 aa24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 BAG1Q99933 345 aaPredicted RBP24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 ARID2Q68CP9 1835 aa24.31■■□□□ 1.48
PTP4A3-204ENST00000521578 PLA2G4BP0C869 781 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 KLRC1P26715 233 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 ADAM17P78536 824 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 GOLGA8FQ08AF8 430 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 GOLGA8DPQ0D2H9 430 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 TBC1D8BQ0IIM8 1120 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 MCM6Q14566 821 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 NOC3LQ8WTT2 800 aaKnown RBP24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 EXOC1Q9NV70 894 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 MAPK8IP1Q9UQF2 711 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 ATP11BQ9Y2G3 1177 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 KCNJ18B7U540 433 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 B4GALT4O60513 344 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 C22orf31O95567 290 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 COPB1P53618 953 aaKnown RBP24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 RTP1P59025 263 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 ASIC1P78348 528 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 KCNJ12Q14500 433 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 SNX17Q15036 470 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 MTHFD1LQ6UB35 978 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 LARP4BQ92615 738 aaKnown RBP24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 PANX2Q96RD6 677 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 SEZ6LQ9BYH1 1024 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 THAP9Q9H5L6 903 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 NOD1Q9Y239 953 aa24.3■■□□□ 1.48
PTP4A3-204ENST00000521578 EVPLQ92817 2033 aa24.29■■□□□ 1.48
PTP4A3-204ENST00000521578 PVALEFA0A1B0GWK0 134 aa24.29■■□□□ 1.48
PTP4A3-204ENST00000521578 AKR1B15C9JRZ8 316 aaPredicted RBP24.29■■□□□ 1.48
PTP4A3-204ENST00000521578 USO1O60763 962 aaKnown RBP24.29■■□□□ 1.48
PTP4A3-204ENST00000521578 POLGP54098 1239 aaPredicted RBP24.29■■□□□ 1.48
PTP4A3-204ENST00000521578 TLE2Q04725 743 aa24.29■■□□□ 1.48
PTP4A3-204ENST00000521578 C1orf53Q5VUE5 145 aa24.29■■□□□ 1.48
PTP4A3-204ENST00000521578 TTI2Q6NXR4 508 aa24.29■■□□□ 1.48
PTP4A3-204ENST00000521578 PADI6Q6TGC4 694 aa24.29■■□□□ 1.48
PTP4A3-204ENST00000521578 IRF2BP1Q8IU81 584 aa24.29■■□□□ 1.48
PTP4A3-204ENST00000521578 FAM126BQ8IXS8 530 aa24.29■■□□□ 1.48
PTP4A3-204ENST00000521578 METTL13Q8N6R0 699 aa24.29■■□□□ 1.48
PTP4A3-204ENST00000521578 LOXHD1Q8IVV2 1947 aa24.28■■□□□ 1.48
PTP4A3-204ENST00000521578 MROH7Q68CQ1 1323 aa24.28■■□□□ 1.48
PTP4A3-204ENST00000521578 SLC12A3P55017 1021 aa24.28■■□□□ 1.48
PTP4A3-204ENST00000521578 ADKP55263 362 aaKnown RBP24.28■■□□□ 1.48
PTP4A3-204ENST00000521578 SYT2Q8N9I0 419 aaPredicted RBP24.28■■□□□ 1.48
PTP4A3-204ENST00000521578 SUGCTQ9HAC7 445 aa24.28■■□□□ 1.48
PTP4A3-204ENST00000521578 MBLAC1A4D2B0 266 aaPredicted RBP24.27■■□□□ 1.48
PTP4A3-204ENST00000521578 N4BP3O15049 544 aa24.27■■□□□ 1.48
PTP4A3-204ENST00000521578 EEF1GP26641 437 aaKnown RBP24.27■■□□□ 1.48
PTP4A3-204ENST00000521578 PMS1P54277 932 aaKnown RBP24.27■■□□□ 1.48
PTP4A3-204ENST00000521578 RUFY4Q6ZNE9 571 aa24.27■■□□□ 1.48
PTP4A3-204ENST00000521578 MAEAQ7L5Y9 396 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms