RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 BICD2Q8TD16 824 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 RSPH1Q8WYR4 309 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 FAM193BQ96PV7 902 aaPredicted RBP12.98□□□□□ -0.33
MRPS28-206ENST00000520946 ESYT1Q9BSJ8 1104 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 EMILIN2Q9BXX0 1053 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 INO80BQ9C086 356 aaPredicted RBP12.98□□□□□ -0.33
MRPS28-206ENST00000520946 GBP3Q9H0R5 595 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 ADAMTS10Q9H324 1103 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 CHST12Q9NRB3 414 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 DISC1Q9NRI5 854 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 USTQ9Y2C2 406 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 INPP5FQ9Y2H2 1132 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 PRR23AA6NEV1 266 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 GAS7O60861 476 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 KLRC2P26717 231 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 NBL1P41271 181 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 CLK2P49760 499 aaKnown RBP12.97□□□□□ -0.33
MRPS28-206ENST00000520946 GPC3P51654 580 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 POLGP54098 1239 aaPredicted RBP12.97□□□□□ -0.33
MRPS28-206ENST00000520946 NECTIN1Q15223 517 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 LONRF3Q496Y0 759 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 KIAA1841Q6NSI8 718 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 CCDC149Q6ZUS6 474 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 DHX32Q7L7V1 743 aaKnown RBP12.97□□□□□ -0.33
MRPS28-206ENST00000520946 FRMD5Q7Z6J6 570 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 AUTS2Q8WXX7 1259 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 TCEANC2Q96MN5 208 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 RNF19AQ9NV58 838 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 MYO10Q9HD67 2058 aa12.97□□□□□ -0.33
MRPS28-206ENST00000520946 MYH9P35579 1960 aaKnown RBP12.96□□□□□ -0.33
MRPS28-206ENST00000520946 C5orf42Q9H799 3197 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 IGLV3-22A0A075B6J6 115 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 CTSAP10619 480 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 EPCAMP16422 314 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 SFNP31947 248 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 ID4P47928 161 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 JAK3P52333 1124 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 PRKCEQ02156 737 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 KRT32Q14532 448 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 NONOQ15233 471 aaKnown RBP eCLIP12.96□□□□□ -0.33
MRPS28-206ENST00000520946 PFKFB3Q16875 520 aaPredicted RBP12.96□□□□□ -0.33
MRPS28-206ENST00000520946 NOMO2Q5JPE7 1267 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 DDX53Q86TM3 631 aaKnown RBP12.96□□□□□ -0.33
MRPS28-206ENST00000520946 ADSSL1Q8N142 457 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 URGCPQ8TCY9 931 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 PGBD4Q96DM1 585 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 RTP3Q9BQQ7 232 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 TEKT3Q9BXF9 490 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 SMOC2Q9H3U7 446 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 SFXN1Q9H9B4 322 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 STK39Q9UEW8 545 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.33
MRPS28-206ENST00000520946 BRPF3Q9ULD4 1205 aa12.96□□□□□ -0.33
MRPS28-206ENST00000520946 PIN4Q9Y237 131 aaKnown RBP12.96□□□□□ -0.33
MRPS28-206ENST00000520946 CSDE1O75534 798 aaKnown RBP12.95□□□□□ -0.34
MRPS28-206ENST00000520946 SSBP05455 408 aaKnown RBP eCLIP12.95□□□□□ -0.34
MRPS28-206ENST00000520946 HMGB1P09429 215 aaKnown RBP12.95□□□□□ -0.34
MRPS28-206ENST00000520946 RAB27AP51159 221 aa12.95□□□□□ -0.34
MRPS28-206ENST00000520946 TDGQ13569 410 aa12.95□□□□□ -0.34
MRPS28-206ENST00000520946 MTERF2Q49AM1 385 aa12.95□□□□□ -0.34
MRPS28-206ENST00000520946 LRCH2Q5VUJ6 765 aa12.95□□□□□ -0.34
MRPS28-206ENST00000520946 KANK3Q6NY19 840 aa12.95□□□□□ -0.34
MRPS28-206ENST00000520946 CATSPER4Q7RTX7 472 aa12.95□□□□□ -0.34
MRPS28-206ENST00000520946 IGSF21Q96ID5 467 aa12.95□□□□□ -0.34
MRPS28-206ENST00000520946 CCDC136Q96JN2 1154 aa12.95□□□□□ -0.34
MRPS28-206ENST00000520946 ZMYND12Q9H0C1 365 aa12.95□□□□□ -0.34
MRPS28-206ENST00000520946 ZBP1Q9H171 429 aa12.95□□□□□ -0.34
MRPS28-206ENST00000520946 ZFHX2Q9C0A1 2572 aaPredicted RBP12.94□□□□□ -0.34
MRPS28-206ENST00000520946 ESYT2A0FGR8 921 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 DDX11L8A8MPP1 907 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 ALDH2P05091 517 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 PHKA2P46019 1235 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 FUT2Q10981 343 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 ERMP1Q7Z2K6 904 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 MIER3Q7Z3K6 550 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 ZNF598Q86UK7 904 aaKnown RBP12.94□□□□□ -0.34
MRPS28-206ENST00000520946 RHPN2Q8IUC4 686 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 SIX5Q8N196 739 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 CCDC148Q8NFR7 591 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 STAMQ92783 540 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 LPPQ93052 612 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 RIT2Q99578 217 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 HINFPQ9BQA5 517 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 MRPL17Q9NRX2 175 aaKnown RBP12.94□□□□□ -0.34
MRPS28-206ENST00000520946 DPP7Q9UHL4 492 aa12.94□□□□□ -0.34
MRPS28-206ENST00000520946 CACNA1HO95180 2353 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 WDFY4Q6ZS81 3184 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 A0A087WZ62 844 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 GALTP07902 379 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 CDC27P30260 824 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 GBP2P32456 591 aaPredicted RBP12.93□□□□□ -0.34
MRPS28-206ENST00000520946 ADD1P35611 737 aaKnown RBP12.93□□□□□ -0.34
MRPS28-206ENST00000520946 RCAN1P53805 252 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 EXOSC10Q01780 885 aaKnown RBP12.93□□□□□ -0.34
MRPS28-206ENST00000520946 COL9A3Q14050 684 aaPredicted RBP12.93□□□□□ -0.34
MRPS28-206ENST00000520946 XKR3Q5GH77 459 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 GPR149Q86SP6 731 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 NLRP4Q96MN2 994 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 JPH2Q9BR39 696 aaPredicted RBP12.93□□□□□ -0.34
MRPS28-206ENST00000520946 FDXACB1Q9BRP7 624 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms