RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 RPUSD2Q8IZ73 545 aaKnown RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 TMEM199Q8N511 208 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 METTL13Q8N6R0 699 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 SPATA20Q8TB22 786 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 DNAJB3Q8WWF6 145 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 PRPF31Q8WWY3 499 aaKnown RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 DDX12PQ92771 950 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 APBB2Q92870 758 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 CCDC47Q96A33 483 aaKnown RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 GSDMAQ96QA5 445 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 PLIN2Q99541 437 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 REEP2Q9BRK0 252 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 PANK2Q9BZ23 570 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 GCOM2Q9BZD3 368 aaPredicted RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 POLR3FQ9H1D9 316 aaPredicted RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 ADAMTS10Q9H324 1103 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 HIPK3Q9H422 1215 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 SUGCTQ9HAC7 445 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 PARVGQ9HBI0 331 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 RMND1Q9NWS8 449 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 MICAL3Q7RTP6 2002 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 SCN5AQ14524 2016 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 GPR182O15218 404 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 TRAK2O60296 914 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 EFCAB14O75071 495 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 NR1I2O75469 434 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 FAM13AO94988 1023 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 SMC2O95347 1197 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 CHRNA1P02708 482 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 SSBP05455 408 aaKnown RBP eCLIP7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 DARSP14868 501 aaKnown RBP7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 RAG1P15918 1043 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 LIG1P18858 919 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 AXLP30530 894 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 THPOP40225 353 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 PPP1R2P41236 205 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 NCKAP1LP55160 1127 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 NLRP11P59045 1033 aaKnown RBP7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 SNRPFP62306 86 aaKnown RBP7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 DPYDQ12882 1025 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 DMP1Q13316 513 aaPredicted RBP7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 DRP2Q13474 957 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 CAPSQ13938 189 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 POSTNQ15063 836 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 COBLL1Q53SF7 1204 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 FAM102BQ5T8I3 360 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 TSHZ1Q6ZSZ6 1077 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 STXBP4Q6ZWJ1 553 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 TRMT1LQ7Z2T5 733 aaKnown RBP7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 RHPN2Q8IUC4 686 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 ZBTB8OSQ8IWT0 167 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 DAW1Q8N136 415 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 LRRC71Q8N4P6 559 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 TRIML1Q8N9V2 468 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 RNF149Q8NC42 400 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 RSPH1Q8WYR4 309 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 WNT8BQ93098 351 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 TMEM143Q96AN5 459 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 CCDC51Q96ER9 411 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 SH2D3AQ9BRG2 576 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 TRAIPQ9BWF2 469 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 STRA6Q9BX79 667 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 FTHL17Q9BXU8 183 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 FZD8Q9H461 694 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 IFT122Q9HBG6 1241 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 CHST12Q9NRB3 414 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 PRMT7Q9NVM4 692 aaPredicted RBP7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 DACT1Q9NYF0 836 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 ARHGAP28Q9P2N2 729 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 AKT3Q9Y243 479 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 CDY2AQ9Y6F7 541 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 TET1Q8NFU7 2136 aa7.03□□□□□ -1.28
IGHV4-55-201ENST00000520889 UBE4BO95155 1302 aa7.02□□□□□ -1.28
IGHV4-55-201ENST00000520889 TTC3P53804 2025 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 A0A087WWV3 80 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 A0A087WZ62 844 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 TRIM43BA6NCK2 446 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 EIF3DO15371 548 aaKnown RBP eCLIP7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 KLRC4O43908 158 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 PPP1R37O75864 691 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 BAIAP3O94812 1187 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 RHOBTB3O94955 611 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 KIF20AO95235 890 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 SFPQP23246 707 aaKnown RBP eCLIP7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 NPTX2P47972 431 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 SARSP49591 514 aaKnown RBP7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 ASIC1P78348 528 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 GTF2BQ00403 316 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 NCBP1Q09161 790 aaKnown RBP7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 PPIGQ13427 754 aaKnown RBP eCLIP7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 CUL4BQ13620 913 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 BMT2Q1RMZ1 405 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 KLHL40Q2TBA0 621 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 PLEKHG4Q58EX7 1191 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 CT47A1Q5JQC4 288 aaPredicted RBP7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 FBXO47Q5MNV8 452 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 ZNF618Q5T7W0 954 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 FOXR2Q6PJQ5 311 aa7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 RBM43Q6ZSC3 357 aaKnown RBP7.02□□□□□ -1.29
IGHV4-55-201ENST00000520889 DYMQ7RTS9 669 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms