RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 NOP56O00567 594 aaKnown RBP12.34□□□□□ -0.43
CLK4-206ENST00000520878 CASP8Q14790 479 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 CLEC4DQ8WXI8 215 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 TMEM143Q96AN5 459 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 FAM84AQ96KN4 292 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 POP1Q99575 1024 aaKnown RBP12.34□□□□□ -0.43
CLK4-206ENST00000520878 LRRC1Q9BTT6 524 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 HSPBP1Q9NZL4 362 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 SCN9AQ15858 1988 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 HOXD13P35453 343 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 GJC1P36383 396 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 JAK3P52333 1124 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 GUCY2DQ02846 1103 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 BFSP1Q12934 665 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 CBWD6Q4V339 395 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 CBWD3Q5JTY5 395 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 CBWD5Q5RIA9 395 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 PCNX4Q63HM2 1172 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 SPATA4Q8NEY3 305 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 DEPTORQ8TB45 409 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 NEK9Q8TD19 979 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 CRYGNQ8WXF5 182 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 SCLT1Q96NL6 688 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 SALL4Q9UJQ4 1053 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 ZNF536O15090 1300 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 ZNF541Q9H0D2 1346 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 ANO9A1A5B4 782 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 PHF20L1A8MW92 1017 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 TBC1D8O95759 1140 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 PSAPP07602 524 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 PLS3P13797 630 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 RPGRIP1Q96KN7 1286 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 IWS1Q96ST2 819 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 FAM213AQ9BRX8 229 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 JPH1Q9HDC5 661 aaPredicted RBP12.34□□□□□ -0.43
CLK4-206ENST00000520878 SASH3O75995 380 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 DLG4P78352 724 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 CDK17Q00537 523 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 CNTN2Q02246 1040 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 INTS8Q75QN2 995 aaKnown RBP12.33□□□□□ -0.44
CLK4-206ENST00000520878 SYNPO2Q9UMS6 1093 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 ADAMTSL1Q8N6G6 1762 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 EIF3DO15371 548 aaKnown RBP eCLIP12.33□□□□□ -0.44
CLK4-206ENST00000520878 SLC26A4O43511 780 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 PLA2G4AP47712 749 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 USP37Q86T82 979 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 CBWD2Q8IUF1 395 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 PPP1R16BQ96T49 567 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 SLC9A2Q9UBY0 812 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 DKC1O60832 514 aaKnown RBP eCLIP12.33□□□□□ -0.44
CLK4-206ENST00000520878 FECHP22830 423 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 STXBP2Q15833 593 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 MTMR14Q8NCE2 650 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 UBE2Q2Q8WVN8 375 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 MOV10L1Q9BXT6 1211 aaKnown RBP12.33□□□□□ -0.44
CLK4-206ENST00000520878 VPS33BQ9H267 617 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 RABEP2Q9H5N1 569 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 EPB41L5Q9HCM4 733 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 NAGPAQ9UK23 515 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 GINS2Q9Y248 185 aa12.33□□□□□ -0.44
CLK4-206ENST00000520878 SLC16A3O15427 465 aaKnown RBP12.32□□□□□ -0.44
CLK4-206ENST00000520878 TUBBP07437 444 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 HSD17B4P51659 736 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 PAPD7Q5XG87 772 aaKnown RBP12.32□□□□□ -0.44
CLK4-206ENST00000520878 HGSNATQ68CP4 663 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 TEPSINQ96N21 525 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 BCCIPQ9P287 314 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLK4-206ENST00000520878 AMFRQ9UKV5 643 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 SMCHD1A6NHR9 2005 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 FOXN3O00409 490 aaPredicted RBP12.32□□□□□ -0.44
CLK4-206ENST00000520878 SRGAP2CP0DJJ0 459 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 SFNP31947 248 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 SOX5P35711 763 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 TNNC1P63316 161 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 IGBP1P78318 339 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 MESDQ14696 234 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 ODF2Q5BJF6 829 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 MIS18BP1Q6P0N0 1132 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 MOB2Q70IA6 237 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 MAATS1Q7Z4T9 603 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 METTL13Q8N6R0 699 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 SLC7A3Q8WY07 619 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 AZI2Q9H6S1 392 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 FRMPD4Q14CM0 1322 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 ADM5C9JUS6 153 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 KRIT1O00522 736 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 SPOPO43791 374 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 CNGA1P29973 690 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 SSTR3P32745 418 aaPredicted RBP12.32□□□□□ -0.44
CLK4-206ENST00000520878 GALCP54803 685 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 TMEM132BQ14DG7 1078 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 RNF10Q8N5U6 811 aaKnown RBP12.32□□□□□ -0.44
CLK4-206ENST00000520878 ZSWIM2Q8NEG5 633 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 HDAC7Q8WUI4 952 aa12.32□□□□□ -0.44
CLK4-206ENST00000520878 A1CFQ9NQ94 594 aaKnown RBP12.32□□□□□ -0.44
CLK4-206ENST00000520878 MYH4Q9Y623 1939 aa12.31□□□□□ -0.44
CLK4-206ENST00000520878 FRMD3A2A2Y4 597 aa12.31□□□□□ -0.44
CLK4-206ENST00000520878 HEXIM1O94992 359 aaKnown RBP12.31□□□□□ -0.44
CLK4-206ENST00000520878 CCNE2O96020 404 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms