RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 FZD9O00144 591 aa7.63□□□□□ -1.19
PABPC1-216ENST00000520868 HTATSF1O43719 755 aaKnown RBP7.63□□□□□ -1.19
PABPC1-216ENST00000520868 CYP2C8P10632 490 aa7.63□□□□□ -1.19
PABPC1-216ENST00000520868 CTCFP49711 727 aaPredicted RBP7.63□□□□□ -1.19
PABPC1-216ENST00000520868 DEFB115Q30KQ5 88 aa7.63□□□□□ -1.19
PABPC1-216ENST00000520868 DENND5AQ6IQ26 1287 aa7.63□□□□□ -1.19
PABPC1-216ENST00000520868 TTLL7Q6ZT98 887 aa7.63□□□□□ -1.19
PABPC1-216ENST00000520868 PNMA8AQ86V59 439 aaPredicted RBP7.63□□□□□ -1.19
PABPC1-216ENST00000520868 ZC3H18Q86VM9 953 aaKnown RBP7.63□□□□□ -1.19
PABPC1-216ENST00000520868 ZDHHC14Q8IZN3 488 aa7.63□□□□□ -1.19
PABPC1-216ENST00000520868 JDP2Q8WYK2 163 aa7.63□□□□□ -1.19
PABPC1-216ENST00000520868 NGRNQ9NPE2 291 aaKnown RBP7.63□□□□□ -1.19
PABPC1-216ENST00000520868 GPR27Q9NS67 375 aa7.63□□□□□ -1.19
PABPC1-216ENST00000520868 PALD1Q9ULE6 856 aa7.63□□□□□ -1.19
PABPC1-216ENST00000520868 SCN7AQ01118 1682 aa7.63□□□□□ -1.19
PABPC1-216ENST00000520868 DICER1Q9UPY3 1922 aaKnown RBP7.62□□□□□ -1.19
PABPC1-216ENST00000520868 FGFR1P11362 822 aa7.62□□□□□ -1.19
PABPC1-216ENST00000520868 MYL6BP14649 208 aa7.62□□□□□ -1.19
PABPC1-216ENST00000520868 GPTP24298 496 aa7.62□□□□□ -1.19
PABPC1-216ENST00000520868 LBX1P52954 281 aa7.62□□□□□ -1.19
PABPC1-216ENST00000520868 VWA3BQ502W6 1294 aa7.62□□□□□ -1.19
PABPC1-216ENST00000520868 RSPO2Q6UXX9 243 aaPredicted RBP7.62□□□□□ -1.19
PABPC1-216ENST00000520868 MILR1Q7Z6M3 343 aa7.62□□□□□ -1.19
PABPC1-216ENST00000520868 MIB1Q86YT6 1006 aa7.62□□□□□ -1.19
PABPC1-216ENST00000520868 GPC2Q8N158 579 aa7.62□□□□□ -1.19
PABPC1-216ENST00000520868 RPGRQ92834 1020 aaKnown RBP7.62□□□□□ -1.19
PABPC1-216ENST00000520868 NYXQ9GZU5 481 aa7.62□□□□□ -1.19
PABPC1-216ENST00000520868 EPB41L1Q9H4G0 881 aa7.62□□□□□ -1.19
PABPC1-216ENST00000520868 CLDND1Q9NY35 253 aa7.62□□□□□ -1.19
PABPC1-216ENST00000520868 WDR33Q9C0J8 1336 aaKnown RBP7.61□□□□□ -1.19
PABPC1-216ENST00000520868 TRAV20A0A0B4J274 112 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 SH3D21A4FU49 640 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 B8ZZF3 427 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 HGSO14964 777 aaPredicted RBP7.61□□□□□ -1.19
PABPC1-216ENST00000520868 DLX3O60479 287 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 DGKIO75912 1065 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 LCP1P13796 627 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 EPS15P42566 896 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 GRM1Q13255 1194 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 SUSD4Q5VX71 490 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 KIF6Q6ZMV9 814 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 DPH6Q7L8W6 267 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 ARMC5Q96C12 935 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 DDX11Q96FC9 970 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 PSMD1Q99460 953 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 SYT3Q9BQG1 590 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 ABT1Q9ULW3 272 aaKnown RBP7.61□□□□□ -1.19
PABPC1-216ENST00000520868 MSRB2Q9Y3D2 182 aa7.61□□□□□ -1.19
PABPC1-216ENST00000520868 SIPA1L3O60292 1781 aaPredicted RBP7.61□□□□□ -1.19
PABPC1-216ENST00000520868 ABCC12Q96J65 1359 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 CACNA1SQ13698 1873 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 NCANO14594 1321 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 MAP3K15Q6ZN16 1313 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 RASSF10A6NK89 507 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 ERVV-1B6SEH8 477 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 PRRG2O14669 202 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 PRODHO43272 600 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 MAFKO60675 156 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 HSPA8P11142 646 aaKnown RBP7.6□□□□□ -1.19
PABPC1-216ENST00000520868 BUD31P41223 144 aaPredicted RBP7.6□□□□□ -1.19
PABPC1-216ENST00000520868 KCNC1P48547 511 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 EIF4A1P60842 406 aaKnown RBP7.6□□□□□ -1.19
PABPC1-216ENST00000520868 CRY2Q49AN0 593 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 LIPIQ6XZB0 460 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 USP53Q70EK8 1073 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 PNISRQ8TF01 805 aaKnown RBP7.6□□□□□ -1.19
PABPC1-216ENST00000520868 DCAF4Q8WV16 495 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 RBM17Q96I25 401 aaKnown RBP7.6□□□□□ -1.19
PABPC1-216ENST00000520868 YIPF4Q9BSR8 244 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 THUMPD2Q9BTF0 503 aaKnown RBP7.6□□□□□ -1.19
PABPC1-216ENST00000520868 ADAM7Q9H2U9 754 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 DDX21Q9NR30 783 aaKnown RBP eCLIP7.6□□□□□ -1.19
PABPC1-216ENST00000520868 ARHGEF4Q9NR80 690 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 FBXL7Q9UJT9 491 aa7.6□□□□□ -1.19
PABPC1-216ENST00000520868 UBN2Q6ZU65 1347 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 TRAF5O00463 557 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 PDPK1O15530 556 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 SLURP1P55000 103 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 MAP2K1Q02750 393 aaPredicted RBP7.59□□□□□ -1.19
PABPC1-216ENST00000520868 RASGRF1Q13972 1273 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 EMC4Q5J8M3 183 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 STEAP3Q658P3 488 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 CYP4F22Q6NT55 531 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 NSMFQ6X4W1 530 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 FAM126BQ8IXS8 530 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 ZNF34Q8IZ26 560 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 RELTQ969Z4 430 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 ZBTB8AQ96BR9 441 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 NOX5Q96PH1 765 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 CRAMP1Q96RY5 1269 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 ZFYVE21Q9BQ24 234 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 PHF20Q9BVI0 1012 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 CCDC113Q9H0I3 377 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 TMX4Q9H1E5 349 aaPredicted RBP7.59□□□□□ -1.19
PABPC1-216ENST00000520868 RTEL1Q9NZ71 1219 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 SIRPGQ9P1W8 387 aa7.59□□□□□ -1.19
PABPC1-216ENST00000520868 BCORQ6W2J9 1755 aa7.59□□□□□ -1.2
PABPC1-216ENST00000520868 SCN4AP35499 1836 aa7.58□□□□□ -1.2
PABPC1-216ENST00000520868 PPIP5K2O43314 1243 aa7.58□□□□□ -1.2
PABPC1-216ENST00000520868 SMARCA5O60264 1052 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms