RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 NSMFQ6X4W1 530 aa10.86□□□□□ -0.67
PDGFRB-207ENST00000520579 ZNF365Q70YC5 407 aa10.86□□□□□ -0.67
PDGFRB-207ENST00000520579 CPNE8Q86YQ8 564 aa10.86□□□□□ -0.67
PDGFRB-207ENST00000520579 CCNJLQ8IV13 435 aa10.86□□□□□ -0.67
PDGFRB-207ENST00000520579 MYOCDQ8IZQ8 938 aa10.86□□□□□ -0.67
PDGFRB-207ENST00000520579 PNMA1Q8ND90 353 aa10.86□□□□□ -0.67
PDGFRB-207ENST00000520579 COA7Q96BR5 231 aa10.86□□□□□ -0.67
PDGFRB-207ENST00000520579 SPATA31D1Q6ZQQ2 1576 aa10.86□□□□□ -0.67
PDGFRB-207ENST00000520579 E9PMD0 336 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 STXBP3O00186 592 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 TOM1O60784 492 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 BAG2O95816 211 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 CCND1P24385 295 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 LRIG3Q6UXM1 1119 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 CD302Q8IX05 232 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 SIX5Q8N196 739 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 JDP2Q8WYK2 163 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 L3MBTL3Q96JM7 780 aaPredicted RBP10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 PYM1Q9BRP8 204 aaKnown RBP10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 MKNK1Q9BUB5 465 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 EBF2Q9HAK2 575 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 PRELID1Q9Y255 219 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 COL4A3BPQ9Y5P4 624 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 ANKRD62A6NC57 917 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 BRAFP15056 766 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 MARCKSL1P49006 195 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 PDE6CP51160 858 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 AGBL2Q5U5Z8 902 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 SMIM5Q71RC9 77 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 BTBD6Q96KE9 485 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 BCAS3Q9H6U6 928 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 KBTBD4Q9NVX7 518 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 PPP1R9AQ9ULJ8 1098 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 PCDHA6Q9UN73 950 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 PCDHA4Q9UN74 947 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 PCDHA8Q9Y5H6 950 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 POC1B-GALNT4F8VUJ3 575 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 EIF3FO00303 357 aaPredicted RBP10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 CALML3P27482 149 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 FUT2Q10981 343 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 TMED2Q15363 201 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 LARP4BQ92615 738 aaKnown RBP10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 FGD4Q96M96 766 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 SLCO1B3Q9NPD5 702 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 CTTNBP2NLQ9P2B4 639 aa10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 ARMCX3Q9UH62 379 aaPredicted RBP10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 KDM6AO15550 1401 aaPredicted RBP10.85□□□□□ -0.67
PDGFRB-207ENST00000520579 SNX3O60493 162 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 KCNH2Q12809 1159 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 LACTB2Q53H82 288 aaPredicted RBP10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 ANO7Q6IWH7 933 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 SLC30A10Q6XR72 485 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 C1orf54Q8WWF1 131 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 GBP5Q96PP8 586 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 CNOT10Q9H9A5 744 aaKnown RBP10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 CACNA1FO60840 1977 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 NR2F2P24468 414 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 USP11P51784 963 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 OVGP1Q12889 678 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 BLMHQ13867 455 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 KYNUQ16719 465 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 UBE2SQ16763 222 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 PFKFB3Q16875 520 aaPredicted RBP10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 SCYL3Q8IZE3 742 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 MREGQ8N565 214 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 TNFRSF25Q93038 417 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 OSBPL10Q9BXB5 764 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 P4HA2O15460 535 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 CALCRLQ16602 461 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 TSNAXIP1Q2TAA8 658 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 FAM26FQ5R3K3 315 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 C9orf72Q96LT7 481 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 CEP295NLQ96MC4 621 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 ZNF317Q96PQ6 595 aaPredicted RBP10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 PITPNM3Q9BZ71 974 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 ATXN2Q99700 1313 aaKnown RBP10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 CFAP73A6NFT4 308 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 ANKRD63C9JTQ0 380 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 NFKBIAP25963 317 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 GALCP54803 685 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 KRT79Q5XKE5 535 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 JAMLQ86YT9 394 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 RAB17Q9H0T7 212 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 GPCPD1Q9NPB8 672 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 MTRF1LQ9UGC7 380 aaKnown RBP10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 ZNF180Q9UJW8 692 aa10.84□□□□□ -0.67
PDGFRB-207ENST00000520579 NOL4O94818 638 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 TSPY3P0CV98 308 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 TSPY8P0CW00 308 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 ZC2HC1CQ53FD0 456 aaPredicted RBP10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 SLC44A4Q53GD3 710 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 CLEC10AQ8IUN9 316 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 C4orf33Q8N1A6 199 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 TTC30BQ8N4P2 665 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 ZBTB38Q8NAP3 1195 aaPredicted RBP10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 HIPK4Q8NE63 616 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 TPCN2Q8NHX9 752 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 ATXN2LQ8WWM7 1075 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms