RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 CEP135Q66GS9 1140 aa17.62■□□□□ 0.41
SNHG6-201ENST00000520348 TMEM139Q8IV31 216 aa17.62■□□□□ 0.41
SNHG6-201ENST00000520348 RETREG2Q8NC44 543 aa17.62■□□□□ 0.41
SNHG6-201ENST00000520348 SLC7A3Q8WY07 619 aa17.62■□□□□ 0.41
SNHG6-201ENST00000520348 CCDC51Q96ER9 411 aa17.62■□□□□ 0.41
SNHG6-201ENST00000520348 KCND1Q9NSA2 647 aa17.62■□□□□ 0.41
SNHG6-201ENST00000520348 ERAP1Q9NZ08 941 aa17.62■□□□□ 0.41
SNHG6-201ENST00000520348 TBX20Q9UMR3 447 aa17.62■□□□□ 0.41
SNHG6-201ENST00000520348 GNEQ9Y223 722 aaKnown RBP17.62■□□□□ 0.41
SNHG6-201ENST00000520348 SIK3Q9Y2K2 1263 aa17.62■□□□□ 0.41
SNHG6-201ENST00000520348 COL1A2P08123 1366 aa17.62■□□□□ 0.41
SNHG6-201ENST00000520348 TNPO2O14787 897 aaKnown RBP17.61■□□□□ 0.41
SNHG6-201ENST00000520348 MAPK13O15264 365 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 SLC16A4O15374 487 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 ADCY6O43306 1168 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 PPFIA4O75335 1185 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 GLRA2P23416 452 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 SOX10P56693 466 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 TBC1D8BQ0IIM8 1120 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 PPP2R5AQ15172 486 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 CCDC40Q4G0X9 1142 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 FKBP15Q5T1M5 1219 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 KSR1Q8IVT5 923 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 ASAP3Q8TDY4 903 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 AFG1LQ8WV93 481 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 GLG1Q92896 1179 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 CAPNS2Q96L46 248 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 IFT74Q96LB3 600 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 PANX2Q96RD6 677 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 JPH2Q9BR39 696 aaPredicted RBP17.61■□□□□ 0.41
SNHG6-201ENST00000520348 C16orf70Q9BSU1 422 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 IKZF4Q9H2S9 585 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 RRAGDQ9NQL2 400 aaPredicted RBP17.61■□□□□ 0.41
SNHG6-201ENST00000520348 KMT5AQ9NQR1 393 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 ZHX1Q9UKY1 873 aaPredicted RBP17.61■□□□□ 0.41
SNHG6-201ENST00000520348 EXOC7Q9UPT5 735 aa17.61■□□□□ 0.41
SNHG6-201ENST00000520348 CASP8AP2Q9UKL3 1982 aa17.6■□□□□ 0.41
SNHG6-201ENST00000520348 AKR1B15C9JRZ8 316 aaPredicted RBP17.6■□□□□ 0.41
SNHG6-201ENST00000520348 PIGRP01833 764 aa17.6■□□□□ 0.41
SNHG6-201ENST00000520348 MMP3P08254 477 aa17.6■□□□□ 0.41
SNHG6-201ENST00000520348 EPB41P11171 864 aaKnown RBP17.6■□□□□ 0.41
SNHG6-201ENST00000520348 RBL2Q08999 1139 aa17.6■□□□□ 0.41
SNHG6-201ENST00000520348 DEFB115Q30KQ5 88 aa17.6■□□□□ 0.41
SNHG6-201ENST00000520348 TAS1R3Q7RTX0 852 aa17.6■□□□□ 0.41
SNHG6-201ENST00000520348 CNGA4Q8IV77 575 aa17.6■□□□□ 0.41
SNHG6-201ENST00000520348 LINC01465Q8N7H1 131 aa17.6■□□□□ 0.41
SNHG6-201ENST00000520348 NUP58Q9BVL2 599 aa17.6■□□□□ 0.41
SNHG6-201ENST00000520348 SPTLC3Q9NUV7 552 aa17.6■□□□□ 0.41
SNHG6-201ENST00000520348 ARMCX3Q9UH62 379 aaPredicted RBP17.6■□□□□ 0.41
SNHG6-201ENST00000520348 Q9Y3F1 56 aa17.6■□□□□ 0.41
SNHG6-201ENST00000520348 ZSWIM8A7E2V4 1837 aa17.6■□□□□ 0.41
SNHG6-201ENST00000520348 A0A1W2PQJ5 194 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 DENND3A2RUS2 1198 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 A6NJR5 290 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 SKILP12757 684 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 PSMC2P35998 433 aaKnown RBP17.59■□□□□ 0.41
SNHG6-201ENST00000520348 CASP4P49662 377 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 FXR1P51114 621 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNHG6-201ENST00000520348 APLP1P51693 650 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 FCGRTP55899 365 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 LACTBP83111 547 aaPredicted RBP17.59■□□□□ 0.41
SNHG6-201ENST00000520348 TNFAIP2Q03169 654 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 MKRN4PQ13434 485 aaPredicted RBP17.59■□□□□ 0.41
SNHG6-201ENST00000520348 SYCP1Q15431 976 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 CCL14Q16627 93 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 ZNF484Q5JVG2 852 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 IER5Q5VY09 327 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 TRMT1LQ7Z2T5 733 aaKnown RBP17.59■□□□□ 0.41
SNHG6-201ENST00000520348 PPFIBP1Q86W92 1011 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 TCP11Q8WWU5 503 aa17.59■□□□□ 0.41
SNHG6-201ENST00000520348 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNHG6-201ENST00000520348 CCDC169A6NNP5 214 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 CLIC2O15247 247 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 MARK3P27448 753 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 ENPEPQ07075 957 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 BRDTQ58F21 947 aaPredicted RBP17.58■□□□□ 0.4
SNHG6-201ENST00000520348 CDCA2Q69YH5 1023 aaPredicted RBP17.58■□□□□ 0.4
SNHG6-201ENST00000520348 SLC39A4Q6P5W5 647 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 CREBRFQ8IUR6 639 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 FAM186BQ8IYM0 893 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 SYCP3Q8IZU3 236 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 OR6J1Q8NGC5 347 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 SLC35C1Q96A29 364 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 TMEM143Q96AN5 459 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 KIFC3Q9BVG8 833 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 EDEM3Q9BZQ6 932 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 TMEM134Q9H6X4 195 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 CAPN11Q9UMQ6 739 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 STYXL1Q9Y6J8 313 aa17.58■□□□□ 0.4
SNHG6-201ENST00000520348 PHLPP2Q6ZVD8 1323 aa17.57■□□□□ 0.4
SNHG6-201ENST00000520348 GTPBP10A4D1E9 387 aaKnown RBP17.57■□□□□ 0.4
SNHG6-201ENST00000520348 STX10O60499 249 aa17.57■□□□□ 0.4
SNHG6-201ENST00000520348 AOC2O75106 756 aa17.57■□□□□ 0.4
SNHG6-201ENST00000520348 C22orf31O95567 290 aa17.57■□□□□ 0.4
SNHG6-201ENST00000520348 CYP2B6P20813 491 aa17.57■□□□□ 0.4
SNHG6-201ENST00000520348 CASP14P31944 242 aa17.57■□□□□ 0.4
SNHG6-201ENST00000520348 CYP2C19P33261 490 aa17.57■□□□□ 0.4
SNHG6-201ENST00000520348 CLCN1P35523 988 aa17.57■□□□□ 0.4
SNHG6-201ENST00000520348 KCNMA1Q12791 1236 aa17.57■□□□□ 0.4
SNHG6-201ENST00000520348 CAPSQ13938 189 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms