RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 PRDM6Q9NQX0 595 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 DACT1Q9NYF0 836 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 RWDD3Q9Y3V2 267 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 MTCH2Q9Y6C9 303 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 MRPL42Q9Y6G3 142 aaKnown RBP15.77■□□□□ 0.12
VEGFA-221ENST00000520265 TTC3P53804 2025 aa15.77■□□□□ 0.11
VEGFA-221ENST00000520265 CHD7Q9P2D1 2997 aa15.76■□□□□ 0.11
VEGFA-221ENST00000520265 EYSQ5T1H1 3165 aa15.76■□□□□ 0.11
VEGFA-221ENST00000520265 INO80B-WBP1J3KQ70 363 aa15.76■□□□□ 0.11
VEGFA-221ENST00000520265 LYPLA2O95372 231 aa15.76■□□□□ 0.11
VEGFA-221ENST00000520265 PHKA2P46019 1235 aa15.76■□□□□ 0.11
VEGFA-221ENST00000520265 FXR2P51116 673 aaKnown RBP eCLIP15.76■□□□□ 0.11
VEGFA-221ENST00000520265 TMEM132AQ24JP5 1023 aa15.76■□□□□ 0.11
VEGFA-221ENST00000520265 KRT79Q5XKE5 535 aa15.76■□□□□ 0.11
VEGFA-221ENST00000520265 CMTR2Q8IYT2 770 aaKnown RBP15.76■□□□□ 0.11
VEGFA-221ENST00000520265 POLR3CQ9BUI4 534 aaPredicted RBP15.76■□□□□ 0.11
VEGFA-221ENST00000520265 TMEM161AQ9NX61 479 aa15.76■□□□□ 0.11
VEGFA-221ENST00000520265 NLRC5Q86WI3 1866 aa15.76■□□□□ 0.11
VEGFA-221ENST00000520265 VWA3AA6NCI4 1184 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 LRRIQ4A6NIV6 560 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 PP2D1A8MPX8 630 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 C9IYK1 514 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 LAD1O00515 517 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 SPATA31C1P0DKV0 1188 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 LIG1P18858 919 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 RPA1P27694 616 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 CUL4AQ13619 759 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 MXD4Q14582 209 aaPredicted RBP15.75■□□□□ 0.11
VEGFA-221ENST00000520265 EP400NLQ6ZTU2 488 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 ECHDC2Q86YB7 292 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 RASSF8Q8NHQ8 419 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 ZNF689Q96CS4 500 aaPredicted RBP15.75■□□□□ 0.11
VEGFA-221ENST00000520265 CDK5RAP3Q96JB5 506 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 C11orf84Q9BUA3 381 aaPredicted RBP15.75■□□□□ 0.11
VEGFA-221ENST00000520265 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.75■□□□□ 0.11
VEGFA-221ENST00000520265 DDX19AQ9NUU7 478 aaKnown RBP15.75■□□□□ 0.11
VEGFA-221ENST00000520265 THEGQ9P2T0 379 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 KIAA1024Q9UPX6 916 aa15.75■□□□□ 0.11
VEGFA-221ENST00000520265 ASAP2O43150 1006 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 HOXA2O43364 376 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 CDC25AP30304 524 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 BMPR1AP36894 532 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 DSC3Q14574 896 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 PADI6Q6TGC4 694 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 BRAPQ7Z569 592 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 SRGAP1Q7Z6B7 1085 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 C4orf32Q8N8J7 132 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 MCPH1Q8NEM0 835 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 ASAP3Q8TDY4 903 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 GPRC5CQ9NQ84 441 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 XPNPEP1Q9NQW7 623 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 AAASQ9NRG9 546 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 STK24Q9Y6E0 443 aa15.74■□□□□ 0.11
VEGFA-221ENST00000520265 H3BNC9 293 aa15.73■□□□□ 0.11
VEGFA-221ENST00000520265 LPXNO60711 386 aa15.73■□□□□ 0.11
VEGFA-221ENST00000520265 SSBP05455 408 aaKnown RBP eCLIP15.73■□□□□ 0.11
VEGFA-221ENST00000520265 ATP2C1P98194 919 aaPredicted RBP15.73■□□□□ 0.11
VEGFA-221ENST00000520265 NCBP1Q09161 790 aaKnown RBP15.73■□□□□ 0.11
VEGFA-221ENST00000520265 FAM43BQ6ZT52 329 aaPredicted RBP15.73■□□□□ 0.11
VEGFA-221ENST00000520265 HELQQ8TDG4 1101 aa15.73■□□□□ 0.11
VEGFA-221ENST00000520265 PLIN2Q99541 437 aa15.73■□□□□ 0.11
VEGFA-221ENST00000520265 BHMT2Q9H2M3 363 aa15.73■□□□□ 0.11
VEGFA-221ENST00000520265 RC3H2Q9HBD1 1191 aaKnown RBP15.73■□□□□ 0.11
VEGFA-221ENST00000520265 IFT122Q9HBG6 1241 aa15.73■□□□□ 0.11
VEGFA-221ENST00000520265 ALG13Q9NP73 1137 aaKnown RBP15.73■□□□□ 0.11
VEGFA-221ENST00000520265 CHST12Q9NRB3 414 aa15.73■□□□□ 0.11
VEGFA-221ENST00000520265 DBR1Q9UK59 544 aaKnown RBP15.73■□□□□ 0.11
VEGFA-221ENST00000520265 INPP5FQ9Y2H2 1132 aa15.73■□□□□ 0.11
VEGFA-221ENST00000520265 PCDHB12Q9Y5F1 795 aa15.73■□□□□ 0.11
VEGFA-221ENST00000520265 RALGAPA2Q2PPJ7 1873 aa15.73■□□□□ 0.11
VEGFA-221ENST00000520265 COL4A6Q14031 1691 aa15.73■□□□□ 0.11
VEGFA-221ENST00000520265 SKIP12755 728 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 XRCC6P12956 609 aaKnown RBP eCLIP15.72■□□□□ 0.11
VEGFA-221ENST00000520265 PRPHP41219 470 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 CAPSQ13938 189 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 TIGD5Q53EQ6 642 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 ZBTB8OSQ8IWT0 167 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 THNSL1Q8IYQ7 743 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 LRRC43Q8N309 656 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 DEPTORQ8TB45 409 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 LPPQ93052 612 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 MRPL38Q96DV4 380 aaKnown RBP15.72■□□□□ 0.11
VEGFA-221ENST00000520265 TRIM6Q9C030 488 aaPredicted RBP15.72■□□□□ 0.11
VEGFA-221ENST00000520265 TMEM117Q9H0C3 514 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 ELAC1Q9H777 363 aaKnown RBP15.72■□□□□ 0.11
VEGFA-221ENST00000520265 MINDY3Q9H8M7 445 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 AGPAT5Q9NUQ2 364 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 FAM105AQ9NUU6 356 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 HCSTQ9UBK5 93 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 DNM3Q9UQ16 869 aa15.72■□□□□ 0.11
VEGFA-221ENST00000520265 PRRC2BQ5JSZ5 2229 aaKnown RBP15.72■□□□□ 0.11
VEGFA-221ENST00000520265 A0A0U1RQF3 1178 aa15.71■□□□□ 0.11
VEGFA-221ENST00000520265 RB1P06400 928 aa15.71■□□□□ 0.11
VEGFA-221ENST00000520265 GLRA2P23416 452 aa15.71■□□□□ 0.11
VEGFA-221ENST00000520265 CA8P35219 290 aa15.71■□□□□ 0.11
VEGFA-221ENST00000520265 RAB27AP51159 221 aa15.71■□□□□ 0.11
VEGFA-221ENST00000520265 CEBPZQ03701 1054 aaKnown RBP15.71■□□□□ 0.11
VEGFA-221ENST00000520265 PDIA5Q14554 519 aa15.71■□□□□ 0.11
VEGFA-221ENST00000520265 IGSF22Q8N9C0 903 aa15.71■□□□□ 0.11
VEGFA-221ENST00000520265 KLHL23Q8NBE8 558 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms