RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 WRAP73Q9P2S5 460 aaPredicted RBP13.97□□□□□ -0.17
CSMD1-205ENST00000519623 LZTS1Q9Y250 596 aa13.97□□□□□ -0.17
CSMD1-205ENST00000519623 CCNT1O60563 726 aaKnown RBP13.96□□□□□ -0.17
CSMD1-205ENST00000519623 GCFC2P16383 781 aaKnown RBP13.96□□□□□ -0.17
CSMD1-205ENST00000519623 XBP1P17861 261 aa13.96□□□□□ -0.17
CSMD1-205ENST00000519623 QARSP47897 775 aaKnown RBP13.96□□□□□ -0.17
CSMD1-205ENST00000519623 NPEPPSP55786 919 aa13.96□□□□□ -0.17
CSMD1-205ENST00000519623 RBM10P98175 930 aaKnown RBP13.96□□□□□ -0.17
CSMD1-205ENST00000519623 DUSP6Q16828 381 aa13.96□□□□□ -0.17
CSMD1-205ENST00000519623 PLA2G4FQ68DD2 849 aa13.96□□□□□ -0.17
CSMD1-205ENST00000519623 PDE12Q6L8Q7 609 aaKnown RBP13.96□□□□□ -0.17
CSMD1-205ENST00000519623 PIK3AP1Q6ZUJ8 805 aa13.96□□□□□ -0.17
CSMD1-205ENST00000519623 KSR1Q8IVT5 923 aa13.96□□□□□ -0.17
CSMD1-205ENST00000519623 SMRP1Q8NCR6 262 aa13.96□□□□□ -0.17
CSMD1-205ENST00000519623 VN1R2Q8NFZ6 395 aa13.96□□□□□ -0.17
CSMD1-205ENST00000519623 MRPS27Q92552 414 aaKnown RBP13.96□□□□□ -0.17
CSMD1-205ENST00000519623 TRAIPQ9BWF2 469 aa13.96□□□□□ -0.17
CSMD1-205ENST00000519623 CYP26B1Q9NR63 512 aa13.96□□□□□ -0.17
CSMD1-205ENST00000519623 DACT1Q9NYF0 836 aa13.96□□□□□ -0.17
CSMD1-205ENST00000519623 ORC3Q9UBD5 711 aaPredicted RBP13.96□□□□□ -0.17
CSMD1-205ENST00000519623 BARX2Q9UMQ3 279 aaPredicted RBP13.96□□□□□ -0.17
CSMD1-205ENST00000519623 ARIH1Q9Y4X5 557 aaPredicted RBP13.96□□□□□ -0.17
CSMD1-205ENST00000519623 FAM205CA6NFA0 338 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 PRR33A8MZF0 331 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 TBX3O15119 743 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 DCXO43602 365 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 P4HBP07237 508 aaKnown RBP13.95□□□□□ -0.18
CSMD1-205ENST00000519623 PBX3P40426 434 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 KCNC3Q14003 757 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 ANKRD1Q15327 319 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 ME3Q16798 604 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 ZNF410Q86VK4 478 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 RHPN2Q8IUC4 686 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 LRRC43Q8N309 656 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 NECAB1Q8N987 351 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 RNF169Q8NCN4 708 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 HELQQ8TDG4 1101 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 TNFRSF25Q93038 417 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 ZNF558Q96NG5 402 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 CDCA3Q99618 268 aaPredicted RBP13.95□□□□□ -0.18
CSMD1-205ENST00000519623 IFT122Q9HBG6 1241 aa13.95□□□□□ -0.18
CSMD1-205ENST00000519623 PUF60Q9UHX1 559 aaKnown RBP13.95□□□□□ -0.18
CSMD1-205ENST00000519623 HIDE1A8MVS5 230 aa13.94□□□□□ -0.18
CSMD1-205ENST00000519623 LARGE1O95461 756 aa13.94□□□□□ -0.18
CSMD1-205ENST00000519623 PLA2G5P39877 138 aa13.94□□□□□ -0.18
CSMD1-205ENST00000519623 PHKA2P46019 1235 aa13.94□□□□□ -0.18
CSMD1-205ENST00000519623 SPIRE1Q08AE8 756 aa13.94□□□□□ -0.18
CSMD1-205ENST00000519623 NR5A1Q13285 461 aa13.94□□□□□ -0.18
CSMD1-205ENST00000519623 EPHA7Q15375 998 aa13.94□□□□□ -0.18
CSMD1-205ENST00000519623 TMEM184AQ6ZMB5 413 aa13.94□□□□□ -0.18
CSMD1-205ENST00000519623 C4orf19Q8IY42 314 aa13.94□□□□□ -0.18
CSMD1-205ENST00000519623 ABI1Q8IZP0 508 aa13.94□□□□□ -0.18
CSMD1-205ENST00000519623 POP1Q99575 1024 aaKnown RBP13.94□□□□□ -0.18
CSMD1-205ENST00000519623 NAP1L4Q99733 375 aaKnown RBP13.94□□□□□ -0.18
CSMD1-205ENST00000519623 JPH2Q9BR39 696 aaPredicted RBP13.94□□□□□ -0.18
CSMD1-205ENST00000519623 INO80BQ9C086 356 aaPredicted RBP13.94□□□□□ -0.18
CSMD1-205ENST00000519623 DHX33Q9H6R0 707 aaKnown RBP13.94□□□□□ -0.18
CSMD1-205ENST00000519623 SPG21Q9NZD8 308 aa13.94□□□□□ -0.18
CSMD1-205ENST00000519623 RGL1Q9NZL6 768 aa13.94□□□□□ -0.18
CSMD1-205ENST00000519623 TRIOO75962 3097 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 ZBTB39O15060 712 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 DKC1O60832 514 aaKnown RBP eCLIP13.93□□□□□ -0.18
CSMD1-205ENST00000519623 ZNF623O75123 536 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 SFPQP23246 707 aaKnown RBP eCLIP13.93□□□□□ -0.18
CSMD1-205ENST00000519623 PPM1AP35813 382 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 KRT17Q04695 432 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 PLPP4Q5VZY2 271 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 ERICH6BQ5W0A0 696 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 POTEDQ86YR6 584 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 RNF135Q8IUD6 432 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 SLC39A11Q8N1S5 342 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 PRPF31Q8WWY3 499 aaKnown RBP13.93□□□□□ -0.18
CSMD1-205ENST00000519623 WASF1Q92558 559 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 GTF3C6Q969F1 213 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 CEP170P1Q96L14 293 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 TCF25Q9BQ70 676 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 S1PR5Q9H228 398 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 NGRNQ9NPE2 291 aaKnown RBP13.93□□□□□ -0.18
CSMD1-205ENST00000519623 USP15Q9Y4E8 981 aaPredicted RBP13.93□□□□□ -0.18
CSMD1-205ENST00000519623 PPME1Q9Y570 386 aa13.93□□□□□ -0.18
CSMD1-205ENST00000519623 MEIS3P2A8K0S8 358 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 LOC730098B7Z3J9 87 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 SLITRK3O94933 977 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 YWHABP31946 246 aaKnown RBP13.92□□□□□ -0.18
CSMD1-205ENST00000519623 KRT2P35908 639 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 BCAR1P56945 870 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 LONRF3Q496Y0 759 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 HERC4Q5GLZ8 1057 aaPredicted RBP13.92□□□□□ -0.18
CSMD1-205ENST00000519623 TWF2Q6IBS0 349 aaKnown RBP13.92□□□□□ -0.18
CSMD1-205ENST00000519623 CATSPER4Q7RTX7 472 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 TMC7Q7Z402 723 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 EXOC8Q8IYI6 725 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 SLFN12Q8IYM2 578 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 MRPL43Q8N983 215 aaKnown RBP13.92□□□□□ -0.18
CSMD1-205ENST00000519623 NSUN7Q8NE18 718 aaKnown RBP13.92□□□□□ -0.18
CSMD1-205ENST00000519623 SLC7A3Q8WY07 619 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 SUSD6Q92537 303 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 LPPQ93052 612 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 TMEM143Q96AN5 459 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 FAM122AQ96E09 287 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms