RNA–Protein interactions for RNA: ENST00000519028.1

TNFRSF10B-204, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-204ENST00000519028 DSC3Q14574 896 aa22.7■■□□□ 1.22
TNFRSF10B-204ENST00000519028 STK38Q15208 465 aa22.7■■□□□ 1.22
TNFRSF10B-204ENST00000519028 ATL3Q6DD88 541 aa22.7■■□□□ 1.22
TNFRSF10B-204ENST00000519028 FAM117BQ6P1L5 589 aa22.7■■□□□ 1.22
TNFRSF10B-204ENST00000519028 KRI1Q8N9T8 703 aaKnown RBP22.7■■□□□ 1.22
TNFRSF10B-204ENST00000519028 RNF149Q8NC42 400 aa22.7■■□□□ 1.22
TNFRSF10B-204ENST00000519028 CDK5RAP3Q96JB5 506 aa22.7■■□□□ 1.22
TNFRSF10B-204ENST00000519028 ZBED2Q9BTP6 218 aa22.7■■□□□ 1.22
TNFRSF10B-204ENST00000519028 POLR3FQ9H1D9 316 aaPredicted RBP22.7■■□□□ 1.22
TNFRSF10B-204ENST00000519028 RGS18Q9NS28 235 aa22.7■■□□□ 1.22
TNFRSF10B-204ENST00000519028 TTC3P53804 2025 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 SPTLC2O15270 562 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 TLL1O43897 1013 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 PPP6R2O75170 966 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 UPP2O95045 317 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 YEATS4O95619 227 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 FAM102BQ5T8I3 360 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 RINT1Q6NUQ1 792 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 Q7L0L9 218 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 SRGAP1Q7Z6B7 1085 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 SYT2Q8N9I0 419 aaPredicted RBP22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 LRRC15Q8TF66 581 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 CALML4Q96GE6 196 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 RAD9AQ99638 391 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 ADAM2Q99965 735 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 NKX2-4Q9H2Z4 354 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 TTYH1Q9H313 450 aaPredicted RBP22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 SEMA6BQ9H3T3 888 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 MINDY3Q9H8M7 445 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 POLD4Q9HCU8 107 aa22.69■■□□□ 1.22
TNFRSF10B-204ENST00000519028 TMEM265A0A087WTH1 108 aa22.68■■□□□ 1.22
TNFRSF10B-204ENST00000519028 PTENP60484 403 aa22.68■■□□□ 1.22
TNFRSF10B-204ENST00000519028 HTRA4P83105 476 aaPredicted RBP22.68■■□□□ 1.22
TNFRSF10B-204ENST00000519028 DNM1Q05193 864 aaKnown RBP22.68■■□□□ 1.22
TNFRSF10B-204ENST00000519028 CAPSQ13938 189 aa22.68■■□□□ 1.22
TNFRSF10B-204ENST00000519028 KARSQ15046 597 aaKnown RBP22.68■■□□□ 1.22
TNFRSF10B-204ENST00000519028 C1orf186Q6ZWK4 172 aa22.68■■□□□ 1.22
TNFRSF10B-204ENST00000519028 DENND3A2RUS2 1198 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 SFPQP23246 707 aaKnown RBP eCLIP22.67■■□□□ 1.222e-8■■■■□ 20.3
TNFRSF10B-204ENST00000519028 DDIT3P35638 169 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 SLC12A3P55017 1021 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 FAM189BP81408 668 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 TFDP1Q14186 410 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 ZNF697Q5TEC3 545 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 SLC24A5Q71RS6 500 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 IFNLR1Q8IU57 520 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 DEFB123Q8N688 67 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 SYMPKQ92797 1274 aaKnown RBP22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 RUSC1Q9BVN2 902 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 NFKBIZQ9BYH8 718 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 ZNF576Q9H609 170 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 CFAP45Q9UL16 551 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 INSL6Q9Y581 213 aa22.67■■□□□ 1.22
TNFRSF10B-204ENST00000519028 LCHNA4D1U4 455 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 C9IYK1 514 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 CA3P07451 260 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 PLA2G4BP0C869 781 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 ZSCAN20P17040 1043 aaPredicted RBP22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 PLCG1P19174 1290 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 PHKA2P46019 1235 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 BSNDQ8WZ55 320 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 SLC28A3Q9HAS3 691 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 CHST12Q9NRB3 414 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 C1orf112Q9NSG2 853 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 BLOC1S4Q9NUP1 217 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 RCOR1Q9UKL0 485 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 CDH23Q9H251 3354 aa22.66■■□□□ 1.22
TNFRSF10B-204ENST00000519028 ARHGEF15O94989 841 aa22.65■■□□□ 1.22
TNFRSF10B-204ENST00000519028 SARSP49591 514 aaKnown RBP22.65■■□□□ 1.22
TNFRSF10B-204ENST00000519028 CATSPER4Q7RTX7 472 aa22.65■■□□□ 1.22
TNFRSF10B-204ENST00000519028 KIFAP3Q92845 792 aa22.65■■□□□ 1.22
TNFRSF10B-204ENST00000519028 CHD9Q3L8U1 2897 aa22.64■■□□□ 1.22
TNFRSF10B-204ENST00000519028 SSBP05455 408 aaKnown RBP eCLIP22.64■■□□□ 1.21
TNFRSF10B-204ENST00000519028 HOXA11P31270 313 aaPredicted RBP22.64■■□□□ 1.21
TNFRSF10B-204ENST00000519028 ARSHQ5FYA8 562 aa22.64■■□□□ 1.21
TNFRSF10B-204ENST00000519028 NPAS4Q8IUM7 802 aa22.64■■□□□ 1.21
TNFRSF10B-204ENST00000519028 DAW1Q8N136 415 aa22.64■■□□□ 1.21
TNFRSF10B-204ENST00000519028 RASSF8Q8NHQ8 419 aa22.64■■□□□ 1.21
TNFRSF10B-204ENST00000519028 RAD54LQ92698 747 aa22.64■■□□□ 1.21
TNFRSF10B-204ENST00000519028 ZNF689Q96CS4 500 aaPredicted RBP22.64■■□□□ 1.21
TNFRSF10B-204ENST00000519028 CHAMP1Q96JM3 812 aa22.64■■□□□ 1.21
TNFRSF10B-204ENST00000519028 FAM161BQ96MY7 647 aa22.64■■□□□ 1.21
TNFRSF10B-204ENST00000519028 MTMR10Q9NXD2 777 aa22.64■■□□□ 1.21
TNFRSF10B-204ENST00000519028 CCDC39Q9UFE4 941 aa22.64■■□□□ 1.21
TNFRSF10B-204ENST00000519028 CUTAO60888 179 aa22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 HIP1RO75146 1068 aa22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 DGKIO75912 1065 aa22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 GUCY2CP25092 1073 aa22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 TAP1Q03518 808 aa22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 MBTD1Q05BQ5 628 aa22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 MAPK7Q13164 816 aa22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 PCBP1Q15365 356 aaKnown RBP eCLIP22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 AXDND1Q5T1B0 1012 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 PPP2R2DQ66LE6 453 aa22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 SP7Q8TDD2 431 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 KCNG4Q8TDN1 519 aa22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 RC3H2Q9HBD1 1191 aaKnown RBP22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 KCND2Q9NZV8 630 aa22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 PCDHB7Q9Y5E2 793 aa22.63■■□□□ 1.21
TNFRSF10B-204ENST00000519028 A0A0U1RQF3 1178 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms