RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 CLCN3P51790 818 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 CRYBB1P53674 252 aaPredicted RBP10.47□□□□□ -0.73
CLN8-203ENST00000518780 MRPS6P82932 125 aaKnown RBP10.47□□□□□ -0.73
CLN8-203ENST00000518780 FAAP100Q0VG06 881 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 CUL4BQ13620 913 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 TMEM132AQ24JP5 1023 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 LRRC26Q2I0M4 334 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 TRIM71Q2Q1W2 868 aaKnown RBP10.47□□□□□ -0.73
CLN8-203ENST00000518780 TRIM60Q495X7 471 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 RBM43Q6ZSC3 357 aaKnown RBP10.47□□□□□ -0.73
CLN8-203ENST00000518780 SRGAP1Q7Z6B7 1085 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 LRRC71Q8N4P6 559 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 MYCT1Q8N699 235 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 DNAJB3Q8WWF6 145 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 STAMQ92783 540 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 SMARCE1Q969G3 411 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 GCOM2Q9BZD3 368 aaPredicted RBP10.47□□□□□ -0.73
CLN8-203ENST00000518780 TMEM134Q9H6X4 195 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 EXOC1Q9NV70 894 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 PCDHB13Q9Y5F0 798 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 PCDHA5Q9Y5H7 936 aa10.47□□□□□ -0.73
CLN8-203ENST00000518780 NPHP3-ACAD11A0A0J9YXS1 232 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 KIAA0355O15063 1070 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 KLRC4O43908 158 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 GPR32O75388 356 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 SELPP16109 830 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 THPOP40225 353 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 NPTX2P47972 431 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 GPC3P51654 580 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 PEX3P56589 373 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 NLRP11P59045 1033 aaKnown RBP10.46□□□□□ -0.73
CLN8-203ENST00000518780 PTENP60484 403 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 EHHADHQ08426 723 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 NCBP1Q09161 790 aaKnown RBP10.46□□□□□ -0.73
CLN8-203ENST00000518780 CT47A1Q5JQC4 288 aaPredicted RBP10.46□□□□□ -0.73
CLN8-203ENST00000518780 RUFY4Q6ZNE9 571 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 MAEAQ7L5Y9 396 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 ZNF720Q7Z2F6 126 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 RHPN2Q8IUC4 686 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 ZBTB8OSQ8IWT0 167 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 FAM178BQ8IXR5 827 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 RNF149Q8NC42 400 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 DEPTORQ8TB45 409 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 HVCN1Q96D96 273 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 ANP32EQ9BTT0 268 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 CELF4Q9BZC1 486 aaKnown RBP10.46□□□□□ -0.73
CLN8-203ENST00000518780 FAM49AQ9H0Q0 323 aaPredicted RBP10.46□□□□□ -0.73
CLN8-203ENST00000518780 BLZF1Q9H2G9 400 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 ADAMTS10Q9H324 1103 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 GPRC5CQ9NQ84 441 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 KMT5AQ9NQR1 393 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 TMEM39AQ9NV64 488 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 TBX21Q9UL17 535 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 ATP11BQ9Y2G3 1177 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 TRPV2Q9Y5S1 764 aa10.46□□□□□ -0.73
CLN8-203ENST00000518780 DOCK5Q9H7D0 1870 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 RSPH10B2B2RC85 870 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 EIF3DO15371 548 aaKnown RBP eCLIP10.45□□□□□ -0.74
CLN8-203ENST00000518780 RSPH10BP0C881 870 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 CKBP12277 381 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 DARSP14868 501 aaKnown RBP10.45□□□□□ -0.74
CLN8-203ENST00000518780 EIF4BP23588 611 aaKnown RBP10.45□□□□□ -0.74
CLN8-203ENST00000518780 RFC2P35250 354 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 NCKAP1LP55160 1127 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 SNRPFP62306 86 aaKnown RBP10.45□□□□□ -0.74
CLN8-203ENST00000518780 RAD51AP2Q09MP3 1159 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 COASYQ13057 564 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 DRP2Q13474 957 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 PNOCQ13519 176 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 CAPSQ13938 189 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 CAMK4Q16566 473 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 FAM187BQ17R55 369 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 KMT5BQ4FZB7 885 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 COBLL1Q53SF7 1204 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 FAM26FQ5R3K3 315 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 CDCA2Q69YH5 1023 aaPredicted RBP10.45□□□□□ -0.74
CLN8-203ENST00000518780 GRAMD1CQ8IYS0 662 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 ASAP3Q8TDY4 903 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 NLRP7Q8WX94 980 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 DHX38Q92620 1227 aaKnown RBP10.45□□□□□ -0.74
CLN8-203ENST00000518780 PRIMPOLQ96LW4 560 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 NOC4LQ9BVI4 516 aaKnown RBP10.45□□□□□ -0.74
CLN8-203ENST00000518780 HIPK3Q9H422 1215 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 ZHX3Q9H4I2 956 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 MRPL44Q9H9J2 332 aaKnown RBP10.45□□□□□ -0.74
CLN8-203ENST00000518780 IFT122Q9HBG6 1241 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 ARHGAP28Q9P2N2 729 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 PRKAG2Q9UGJ0 569 aa10.45□□□□□ -0.74
CLN8-203ENST00000518780 FRMPD3Q5JV73 1810 aa10.44□□□□□ -0.74
CLN8-203ENST00000518780 UBE4BO95155 1302 aa10.44□□□□□ -0.74
CLN8-203ENST00000518780 A0A087WZ62 844 aa10.44□□□□□ -0.74
CLN8-203ENST00000518780 LRRIQ4A6NIV6 560 aa10.44□□□□□ -0.74
CLN8-203ENST00000518780 CCDC169A6NNP5 214 aa10.44□□□□□ -0.74
CLN8-203ENST00000518780 SFI1A8K8P3 1242 aa10.44□□□□□ -0.74
CLN8-203ENST00000518780 K7ERI5 159 aa10.44□□□□□ -0.74
CLN8-203ENST00000518780 GPR182O15218 404 aa10.44□□□□□ -0.74
CLN8-203ENST00000518780 VTNP04004 478 aa10.44□□□□□ -0.74
CLN8-203ENST00000518780 PRR29P0C7W0 189 aa10.44□□□□□ -0.74
CLN8-203ENST00000518780 SRGAP2CP0DJJ0 459 aa10.44□□□□□ -0.74
CLN8-203ENST00000518780 SFPQP23246 707 aaKnown RBP eCLIP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms