RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 UCN2Q96RP3 112 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 ZNF287Q9HBT7 754 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 TFIP11Q9UBB9 837 aaKnown RBP7.09□□□□□ -1.27
PABPC1-207ENST00000518716 ADD3Q9UEY8 706 aaKnown RBP7.09□□□□□ -1.27
PABPC1-207ENST00000518716 MTUS1Q9ULD2 1270 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.09□□□□□ -1.27
PABPC1-207ENST00000518716 PPME1Q9Y570 386 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 INSL6Q9Y581 213 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 TPRP12270 2363 aaKnown RBP7.09□□□□□ -1.28
PABPC1-207ENST00000518716 DCHS1Q96JQ0 3298 aa7.09□□□□□ -1.28
PABPC1-207ENST00000518716 PALM3A6NDB9 673 aaPredicted RBP7.08□□□□□ -1.28
PABPC1-207ENST00000518716 WDR64B1ANS9 1081 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 H3BNC9 293 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 HAS3O00219 553 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 FOXP2O15409 715 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 GPAA1O43292 621 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 MMP3P08254 477 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 FGRP09769 529 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 HOXD8P13378 290 aaPredicted RBP7.08□□□□□ -1.28
PABPC1-207ENST00000518716 CD68P34810 354 aaPredicted RBP7.08□□□□□ -1.28
PABPC1-207ENST00000518716 TFAP4Q01664 338 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 ARHGAP1Q07960 439 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 PPP2R5BQ15173 497 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 MSMPQ1L6U9 139 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 EPC2Q52LR7 807 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 TCEAL5Q5H9L2 206 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 TTBK2Q6IQ55 1244 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 NSMFQ6X4W1 530 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 SLC30A10Q6XR72 485 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.08□□□□□ -1.282e-26■■■■■ 27.9
PABPC1-207ENST00000518716 PLEKHM2Q8IWE5 1019 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 FTSJ3Q8IY81 847 aaKnown RBP7.08□□□□□ -1.28
PABPC1-207ENST00000518716 KBTBD3Q8NAB2 608 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 SCFD2Q8WU76 684 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 AFG1LQ8WV93 481 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 COL26A1Q96A83 441 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 MFSD14AQ96MC6 490 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 ZBTB40Q9NUA8 1239 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 GTF2IRD1Q9UHL9 959 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 CTNNA3Q9UI47 895 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 CCPG1Q9ULG6 757 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 COL4A6Q14031 1691 aa7.08□□□□□ -1.28
PABPC1-207ENST00000518716 EP300Q09472 2414 aaPredicted RBP7.08□□□□□ -1.28
PABPC1-207ENST00000518716 LINC01387J3KSC0 135 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 M0R2C6 588 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 RNF113AO15541 343 aaKnown RBP7.07□□□□□ -1.28
PABPC1-207ENST00000518716 NMT2O60551 498 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 LGR5O75473 907 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 TXNP10599 105 aaKnown RBP7.07□□□□□ -1.28
PABPC1-207ENST00000518716 GNAT2P19087 354 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 HOXC8P31273 242 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 RPS6P62753 249 aaKnown RBP7.07□□□□□ -1.28
PABPC1-207ENST00000518716 DLX2Q07687 328 aaPredicted RBP7.07□□□□□ -1.28
PABPC1-207ENST00000518716 PTK7Q13308 1070 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 IKBKEQ14164 716 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 TIGD5Q53EQ6 642 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 BRDTQ58F21 947 aaPredicted RBP7.07□□□□□ -1.28
PABPC1-207ENST00000518716 TXNDC11Q6PKC3 985 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 RGS22Q8NE09 1264 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 DNERQ8NFT8 737 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 PANK1Q8TE04 598 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 EDAQ92838 391 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 TOP1MTQ969P6 601 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 NAP1L5Q96NT1 182 aaPredicted RBP7.07□□□□□ -1.28
PABPC1-207ENST00000518716 SAMD11Q96NU1 681 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 HDAC6Q9UBN7 1215 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 CCDC39Q9UFE4 941 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 USP20Q9Y2K6 914 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 CACNA1BQ00975 2339 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 ATG2AQ2TAZ0 1938 aa7.07□□□□□ -1.28
PABPC1-207ENST00000518716 RAD50Q92878 1312 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 DNAH14Q0VDD8 3507 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.06□□□□□ -1.28
PABPC1-207ENST00000518716 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.06□□□□□ -1.28
PABPC1-207ENST00000518716 C5orf67F2Z3F1 127 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 NCK2O43639 380 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 F2P00734 622 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 GHRHP01286 108 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 TSPY3P0CV98 308 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 TSPY8P0CW00 308 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 ZNF200P98182 395 aaPredicted RBP7.06□□□□□ -1.28
PABPC1-207ENST00000518716 PDE4BQ07343 736 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 PPARAQ07869 468 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 PTPROQ16827 1216 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 PLEKHG4Q58EX7 1191 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 ZNF618Q5T7W0 954 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 FAM117BQ6P1L5 589 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 RNF207Q6ZRF8 634 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 BEND4Q6ZU67 534 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 DBF4BQ8NFT6 615 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 DCAF4Q8WV16 495 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 OSBPL7Q9BZF2 842 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 UPF3BQ9BZI7 483 aaKnown RBP7.06□□□□□ -1.28
PABPC1-207ENST00000518716 MAF1Q9H063 256 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 MUC3BQ9H195 1237 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 NSUN3Q9H649 340 aaKnown RBP7.06□□□□□ -1.28
PABPC1-207ENST00000518716 INCENPQ9NQS7 918 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 MUTYHQ9UIF7 546 aa7.06□□□□□ -1.28
PABPC1-207ENST00000518716 DDX41Q9UJV9 622 aaKnown RBP7.06□□□□□ -1.28
PABPC1-207ENST00000518716 WDR19Q8NEZ3 1342 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms