RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 EXOC8Q8IYI6 725 aa11.66□□□□□ -0.54
PABPC1-203ENST00000517921 LRRC71Q8N4P6 559 aa11.66□□□□□ -0.54
PABPC1-203ENST00000517921 LINC01465Q8N7H1 131 aa11.66□□□□□ -0.54
PABPC1-203ENST00000517921 TMEM161BQ8NDZ6 487 aa11.66□□□□□ -0.54
PABPC1-203ENST00000517921 KLHDC9Q8NEP7 349 aa11.66□□□□□ -0.54
PABPC1-203ENST00000517921 SPIRE2Q8WWL2 714 aa11.66□□□□□ -0.54
PABPC1-203ENST00000517921 JPH2Q9BR39 696 aaPredicted RBP11.66□□□□□ -0.54
PABPC1-203ENST00000517921 SPC25Q9HBM1 224 aa11.66□□□□□ -0.54
PABPC1-203ENST00000517921 XPNPEP3Q9NQH7 507 aa11.66□□□□□ -0.54
PABPC1-203ENST00000517921 FANCLQ9NW38 375 aa11.66□□□□□ -0.54
PABPC1-203ENST00000517921 PDE4DIPQ5VU43 2346 aa11.66□□□□□ -0.54
PABPC1-203ENST00000517921 CCDC169A6NNP5 214 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 KPNA6O60684 536 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 KIF20AO95235 890 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 SMIM10L2AP0DMW4 78 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 SMIM10L2BP0DMW5 78 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 ATP1A3P13637 1013 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 CLCN3P51790 818 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 TPM4P67936 248 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 GTF2BQ00403 316 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 LRRC63Q05C16 580 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 KNOP1Q1ED39 458 aaKnown RBP11.65□□□□□ -0.54
PABPC1-203ENST00000517921 GNASQ5JWF2 1037 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 CCSAPQ6IQ19 270 aaPredicted RBP11.65□□□□□ -0.54
PABPC1-203ENST00000517921 SARM1Q6SZW1 724 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 MTHFD1LQ6UB35 978 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 LRRC55Q6ZSA7 311 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 STXBP4Q6ZWJ1 553 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 KSR1Q8IVT5 923 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 SLC17A8Q8NDX2 589 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 LMBR1Q8WVP7 490 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 TCP11Q8WWU5 503 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 KCNN1Q92952 543 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 ZBTB10Q96DT7 871 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 IFT74Q96LB3 600 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 NTPCRQ9BSD7 190 aaKnown RBP11.65□□□□□ -0.54
PABPC1-203ENST00000517921 KIFC3Q9BVG8 833 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 KATNAL1Q9BW62 490 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 KMT5AQ9NQR1 393 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 SAMSN1Q9NSI8 373 aaKnown RBP11.65□□□□□ -0.54
PABPC1-203ENST00000517921 TYW1Q9NV66 732 aaKnown RBP11.65□□□□□ -0.54
PABPC1-203ENST00000517921 ARHGAP28Q9P2N2 729 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 PDCD11Q14690 1871 aaKnown RBP11.65□□□□□ -0.54
PABPC1-203ENST00000517921 RALGAPA2Q2PPJ7 1873 aa11.65□□□□□ -0.54
PABPC1-203ENST00000517921 MAGEB2O15479 319 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 TGFB1I1O43294 461 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 ZEB2O60315 1214 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 MSCO60682 206 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 KLRC1P26715 233 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 HOXC8P31273 242 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 NAMPTP43490 491 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 CAPSQ13938 189 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 PPP2R5AQ15172 486 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 TPD52L1Q16890 204 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-203ENST00000517921 MARCH8Q5T0T0 291 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 EFCAB12Q6NXP0 572 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 HAUS6Q7Z4H7 955 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 IRF2BP1Q8IU81 584 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 ZC3H3Q8IXZ2 948 aaKnown RBP11.64□□□□□ -0.55
PABPC1-203ENST00000517921 RETREG2Q8NC44 543 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 PPP1R13LQ8WUF5 828 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 PSPC1Q8WXF1 523 aaKnown RBP11.64□□□□□ -0.55
PABPC1-203ENST00000517921 HVCN1Q96D96 273 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 TSG101Q99816 390 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 MTG1Q9BT17 334 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-203ENST00000517921 IKZF4Q9H2S9 585 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 THAP9Q9H5L6 903 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 SUGCTQ9HAC7 445 aa11.64□□□□□ -0.55
PABPC1-203ENST00000517921 HMX1Q9NP08 348 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-203ENST00000517921 NRCAMQ92823 1304 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 DENND3A2RUS2 1198 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 MBLAC1A4D2B0 266 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-203ENST00000517921 RRN3P2A6NIE6 340 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 H0YCG3 227 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 PDXKO00764 312 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 GJB1P08034 283 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 KCNA4P22459 653 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 SMTNP53814 917 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 CHMP4BP1P59074 171 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 ADAM17P78536 824 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 LAMTOR4Q0VGL1 99 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 HIC1Q14526 733 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 MTFR1Q15390 333 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 KCNA10Q16322 511 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 EDRF1Q3B7T1 1238 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 HSP90AA4PQ58FG1 418 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 LHX8Q68G74 356 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 CDCA2Q69YH5 1023 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-203ENST00000517921 CXCL17Q6UXB2 119 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 TAS1R3Q7RTX0 852 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 MAP4K3Q8IVH8 894 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 CSGALNACT2Q8N6G5 542 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 METTL13Q8N6R0 699 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 NOC3LQ8WTT2 800 aaKnown RBP11.63□□□□□ -0.55
PABPC1-203ENST00000517921 PRPF31Q8WWY3 499 aaKnown RBP11.63□□□□□ -0.55
PABPC1-203ENST00000517921 ACCSQ96QU6 501 aa11.63□□□□□ -0.55
PABPC1-203ENST00000517921 SRRTQ9BXP5 876 aaKnown RBP11.63□□□□□ -0.55
PABPC1-203ENST00000517921 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.63□□□□□ -0.552e-7■■■□□ 16.8
PABPC1-203ENST00000517921 SETD4Q9NVD3 440 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms