RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 BRMS1Q9HCU9 246 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 RGS18Q9NS28 235 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 C1orf112Q9NSG2 853 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 LRFN2Q9ULH4 789 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 AKT3Q9Y243 479 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 MYO7AQ13402 2215 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 MGEA5O60502 916 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 CCNT1O60563 726 aaKnown RBP11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 DKC1O60832 514 aaKnown RBP eCLIP11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 GLP2RO95838 553 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 KRT2P35908 639 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 NLRP11P59045 1033 aaKnown RBP11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 FAM189BP81408 668 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 CDC42EP1Q00587 391 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 PPP2R5CQ13362 524 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 SLC24A5Q71RS6 500 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 DGLUCYQ7Z3D6 616 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 FAM228AQ86W67 206 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 LRRC71Q8N4P6 559 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 NKD2Q969F2 451 aaPredicted RBP11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 RIPOR3Q96MK2 946 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 C11orf84Q9BUA3 381 aaPredicted RBP11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 PLVAPQ9BX97 442 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 LMAN2LQ9H0V9 348 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 KCNMB3Q9NPA1 279 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 PCDHB7Q9Y5E2 793 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 MICAL3Q7RTP6 2002 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 NLRC5Q86WI3 1866 aa11.87□□□□□ -0.51
PDGFRB-203ENST00000517660 C9IYK1 514 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 EML1O00423 815 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 JAK2O60674 1132 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 CSPG5O95196 566 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 BAG4O95429 457 aaKnown RBP11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 EIF4BP23588 611 aaKnown RBP11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 QARSP47897 775 aaKnown RBP11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 DNM2P50570 870 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 GPC3P51654 580 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 NR5A1Q13285 461 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 TRIM29Q14134 588 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 DSC3Q14574 896 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 PTPN21Q16825 1174 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 MTERF2Q49AM1 385 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 NAALADL2Q58DX5 795 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 EARS2Q5JPH6 523 aaKnown RBP11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 ADGRD2Q7Z7M1 963 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 HAS1Q92839 578 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 TNFRSF25Q93038 417 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 CEP89Q96ST8 783 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 SEPT9Q9UHD8 586 aaPredicted RBP11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 VAV3Q9UKW4 847 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 LIMCH1Q9UPQ0 1083 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 USP15Q9Y4E8 981 aaPredicted RBP11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 MRPL42Q9Y6G3 142 aaKnown RBP11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 BAHCC1Q9P281 2608 aa11.86□□□□□ -0.51
PDGFRB-203ENST00000517660 RALGAPA2Q2PPJ7 1873 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 IGKV6-21A0A0C4DH24 114 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 MMP1P03956 469 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 P4HBP07237 508 aaKnown RBP11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 DARSP14868 501 aaKnown RBP11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 ZSCAN20P17040 1043 aaPredicted RBP11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 IBSPP21815 317 aaPredicted RBP11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 DNAJB1P25685 340 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 COASYQ13057 564 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 EPHA7Q15375 998 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 SLFN12Q8IYM2 578 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 NLRP7Q8WX94 980 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 P2RX5Q93086 422 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 SCLT1Q96NL6 688 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 JPH2Q9BR39 696 aaPredicted RBP11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 GCOM2Q9BZD3 368 aaPredicted RBP11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 ELAC1Q9H777 363 aaKnown RBP11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 ATP6V0A4Q9HBG4 840 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 TMEM161AQ9NX61 479 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 PLAGL2Q9UPG8 496 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 CHD6Q8TD26 2715 aa11.85□□□□□ -0.51
PDGFRB-203ENST00000517660 TTC3P53804 2025 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 TMEM150BA6NC51 233 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 TBKBP1A7MCY6 615 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 BTBD18B2RXH4 712 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 MAFO75444 373 aaPredicted RBP11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 GATMP50440 423 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 PAN2Q504Q3 1202 aaKnown RBP11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 FAM102BQ5T8I3 360 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 ANO5Q75V66 913 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 DIS3L2Q8IYB7 885 aaKnown RBP11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 EXOC8Q8IYI6 725 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 SUSD6Q92537 303 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 ZNF668Q96K58 619 aaPredicted RBP11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 RPGRIP1Q96KN7 1286 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 ZSCAN31Q96LW9 406 aaPredicted RBP11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 SH2D3AQ9BRG2 576 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 LLPHQ9BRT6 129 aaKnown RBP11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 PHF7Q9BWX1 381 aaPredicted RBP11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 SUCLA2Q9P2R7 463 aaPredicted RBP11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 BARX2Q9UMQ3 279 aaPredicted RBP11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 PPME1Q9Y570 386 aa11.84□□□□□ -0.51
PDGFRB-203ENST00000517660 CACNA1GO43497 2377 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms