RNA–Protein interactions for RNA: ENST00000516424.1

RN7SKP253-201, Transcript of RNA, 7SK small nuclear pseudogene 253, humanhuman

BASIC

Gene RN7SKP253, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP253-201ENST00000516424 SLC39A2Q9NP94 309 aa7.47□□□□□ -1.21
RN7SKP253-201ENST00000516424 OVOS2A0A0J9YW53 1432 aa7.46□□□□□ -1.21
RN7SKP253-201ENST00000516424 OVOS2Q6IE36 1432 aa7.46□□□□□ -1.21
RN7SKP253-201ENST00000516424 ARID5AQ03989 594 aa7.46□□□□□ -1.22
RN7SKP253-201ENST00000516424 CRB2Q5IJ48 1285 aa7.46□□□□□ -1.22
RN7SKP253-201ENST00000516424 NSMFQ6X4W1 530 aa7.46□□□□□ -1.22
RN7SKP253-201ENST00000516424 IFNL3Q8IZI9 196 aa7.46□□□□□ -1.22
RN7SKP253-201ENST00000516424 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.46□□□□□ -1.22
RN7SKP253-201ENST00000516424 TINF2Q9BSI4 451 aa7.46□□□□□ -1.22
RN7SKP253-201ENST00000516424 IPPKQ9H8X2 491 aa7.46□□□□□ -1.22
RN7SKP253-201ENST00000516424 NPIPB8E9PQR5 432 aa7.45□□□□□ -1.22
RN7SKP253-201ENST00000516424 APAF1O14727 1248 aa7.45□□□□□ -1.22
RN7SKP253-201ENST00000516424 DIAPH1O60610 1272 aaKnown RBP7.45□□□□□ -1.22
RN7SKP253-201ENST00000516424 YOD1Q5VVQ6 348 aaPredicted RBP7.45□□□□□ -1.22
RN7SKP253-201ENST00000516424 RNF207Q6ZRF8 634 aa7.45□□□□□ -1.22
RN7SKP253-201ENST00000516424 ANKS3Q6ZW76 656 aa7.45□□□□□ -1.22
RN7SKP253-201ENST00000516424 TRMT2AQ8IZ69 625 aaKnown RBP7.45□□□□□ -1.22
RN7SKP253-201ENST00000516424 SH3RF2Q8TEC5 729 aa7.45□□□□□ -1.22
RN7SKP253-201ENST00000516424 RUNDC1Q96C34 613 aa7.45□□□□□ -1.22
RN7SKP253-201ENST00000516424 PLEKHF1Q96S99 279 aa7.45□□□□□ -1.22
RN7SKP253-201ENST00000516424 NUDCQ9Y266 331 aa7.45□□□□□ -1.22
RN7SKP253-201ENST00000516424 TMEM94Q12767 1356 aa7.45□□□□□ -1.22
RN7SKP253-201ENST00000516424 XIRP1Q702N8 1843 aaKnown RBP7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 TCRBV5S4A2TA0A5A2 114 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 ESYT3A0FGR9 886 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 IQCA1LA6NCM1 817 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 FAM47E-STBD1D6RA91 191 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 POLD1P28340 1107 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 FOXE3Q13461 319 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 ZNF568Q3ZCX4 644 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 CCDC146Q8IYE0 955 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 FUKQ8N0W3 1084 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 ORAI2Q96SN7 254 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 RNF123Q5XPI4 1314 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 USP54Q70EL1 1684 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 DCCP43146 1447 aa7.44□□□□□ -1.22
RN7SKP253-201ENST00000516424 C1orf167Q5SNV9 1468 aa7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 U2AF1L5P0DN76 240 aaPredicted RBP7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 COMTP21964 271 aa7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 DNAJA1P31689 397 aaKnown RBP7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 RAC3P60763 192 aa7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 U2AF1Q01081 240 aaKnown RBP eCLIP7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 DBPQ10586 325 aaPredicted RBP7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 IFRD2Q12894 506 aaPredicted RBP7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 TOP3AQ13472 1001 aaPredicted RBP7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 RRS1Q15050 365 aaKnown RBP7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 RNF151Q2KHN1 245 aa7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 NRN1LQ496H8 165 aa7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 AGBL4Q5VU57 503 aa7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 IGFL4Q6B9Z1 124 aa7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 TCP11L2Q8N4U5 519 aa7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 PIK3C2AO00443 1686 aa7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 MARF1Q9Y4F3 1742 aaKnown RBP7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 CDK12Q9NYV4 1490 aaPredicted RBP7.43□□□□□ -1.22
RN7SKP253-201ENST00000516424 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.42□□□□□ -1.22
RN7SKP253-201ENST00000516424 KLF4O43474 513 aa7.42□□□□□ -1.22
RN7SKP253-201ENST00000516424 ATF3P18847 181 aa7.42□□□□□ -1.22
RN7SKP253-201ENST00000516424 RRADP55042 308 aa7.42□□□□□ -1.22
RN7SKP253-201ENST00000516424 SLFN5Q08AF3 891 aa7.42□□□□□ -1.22
RN7SKP253-201ENST00000516424 USP39Q53GS9 565 aaKnown RBP7.42□□□□□ -1.22
RN7SKP253-201ENST00000516424 MIIPQ5JXC2 388 aa7.42□□□□□ -1.22
RN7SKP253-201ENST00000516424 EDAQ92838 391 aa7.42□□□□□ -1.22
RN7SKP253-201ENST00000516424 ZNF503Q96F45 646 aa7.42□□□□□ -1.22
RN7SKP253-201ENST00000516424 ALG1Q9BT22 464 aa7.42□□□□□ -1.22
RN7SKP253-201ENST00000516424 OAZ3Q9UMX2 235 aa7.42□□□□□ -1.22
RN7SKP253-201ENST00000516424 MST1RQ04912 1400 aa7.42□□□□□ -1.22
RN7SKP253-201ENST00000516424 TRAV20A0A0B4J274 112 aa7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 U2SURPO15042 1029 aaKnown RBP7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 PPM1GO15355 546 aaPredicted RBP7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 CUTAO60888 179 aa7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 TCF3P15923 654 aa7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 FHL2Q14192 279 aa7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 NOLC1Q14978 699 aaKnown RBP eCLIP7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 BTBD8Q5XKL5 378 aa7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 EXTL1Q92935 676 aa7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 DPYSL5Q9BPU6 564 aa7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 PNNQ9H307 717 aaKnown RBP7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 TRAF6Q9Y4K3 522 aa7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 MAP3K19Q56UN5 1328 aa7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 ZNF335Q9H4Z2 1342 aaPredicted RBP7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 IQSEC2Q5JU85 1478 aa7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 LRRC7Q96NW7 1537 aa7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 PEAK1Q9H792 1746 aa7.41□□□□□ -1.22
RN7SKP253-201ENST00000516424 FAM90A27PA6NNH2 459 aa7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 RAD17O75943 681 aa7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 PTPN1P18031 435 aaKnown RBP7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 CR2P20023 1033 aa7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 ACO1P21399 889 aaKnown RBP7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 TMPOP42166 694 aaKnown RBP7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 EIF4A2Q14240 407 aaKnown RBP7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 HSP90AB2PQ58FF8 381 aa7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 Q6ZSN1 163 aa7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 KRT28Q7Z3Y7 464 aa7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 WDR63Q8IWG1 891 aa7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 ST13P5Q8NFI4 369 aaPredicted RBP7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 SRPK3Q9UPE1 567 aa7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 KIF24Q5T7B8 1368 aa7.4□□□□□ -1.22
RN7SKP253-201ENST00000516424 TRPM3Q9HCF6 1732 aaPredicted RBP7.39□□□□□ -1.23
RN7SKP253-201ENST00000516424 KIF1AQ12756 1690 aa7.39□□□□□ -1.23
RN7SKP253-201ENST00000516424 SBNO1A3KN83 1393 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms