RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 FAM126AQ9BYI3 521 aaPredicted RBP9.3□□□□□ -0.92
SFXN1-211ENST00000515736 HOMER2Q9NSB8 354 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 HIF3AQ9Y2N7 669 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 ATP8A1Q9Y2Q0 1164 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 MROH7-TTC4A0A0A0MT08 1334 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 FAM205AQ6ZU69 1335 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 PAPPA2Q9BXP8 1791 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 A0A087X0B3 334 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 TRAPPC10P48553 1259 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 RGS19P49795 217 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 CDKN1CP49918 316 aaPredicted RBP9.29□□□□□ -0.92
SFXN1-211ENST00000515736 ZNF143P52747 638 aaPredicted RBP9.29□□□□□ -0.92
SFXN1-211ENST00000515736 TPM4P67936 248 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 GUCY1B3Q02153 619 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 TROAPQ12815 778 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 SUZ12Q15022 739 aaKnown RBP9.29□□□□□ -0.92
SFXN1-211ENST00000515736 AXDND1Q5T1B0 1012 aaPredicted RBP9.29□□□□□ -0.92
SFXN1-211ENST00000515736 GALNT17Q6IS24 598 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 MCATQ8IVS2 390 aaKnown RBP9.29□□□□□ -0.92
SFXN1-211ENST00000515736 ZNF384Q8TF68 577 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 EXOC2Q96KP1 924 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 LZTS2Q9BRK4 669 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 SDF4Q9BRK5 362 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 SH3GLB2Q9NR46 395 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 RNF186Q9NXI6 227 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 SAGE1Q9NXZ1 904 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 HPSEQ9Y251 543 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 CLIC4Q9Y696 253 aa9.29□□□□□ -0.92
SFXN1-211ENST00000515736 LOC100289279A0A1B0GTE1 492 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 A0A1W2PQU0 124 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 KIF28PB7ZC32 967 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 AGRPO00253 132 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 NEMFO60524 1076 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 SLFN14P0C7P3 912 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 CALML3P27482 149 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 SMARCA1P28370 1054 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 PRDX5P30044 214 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 L1CAMP32004 1257 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 ETF1P62495 437 aaKnown RBP9.28□□□□□ -0.92
SFXN1-211ENST00000515736 ERVK-24P63145 666 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 CEBPZQ03701 1054 aaKnown RBP9.28□□□□□ -0.92
SFXN1-211ENST00000515736 CHAF1AQ13111 956 aaPredicted RBP9.28□□□□□ -0.92
SFXN1-211ENST00000515736 PTPAQ15257 358 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 CAMK4Q16566 473 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 BBS9Q3SYG4 887 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 CT47A1Q5JQC4 288 aaPredicted RBP9.28□□□□□ -0.92
SFXN1-211ENST00000515736 HP1BP3Q5SSJ5 553 aaPredicted RBP9.28□□□□□ -0.92
SFXN1-211ENST00000515736 C12orf60Q5U649 245 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 RESP18Q5W5W9 173 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 SLCO4C1Q6ZQN7 724 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 TMTC3Q6ZXV5 915 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 WFDC8Q8IUA0 241 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 DIS3L2Q8IYB7 885 aaKnown RBP9.28□□□□□ -0.92
SFXN1-211ENST00000515736 SLFN12Q8IYM2 578 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 GOLGA6L1Q8N7Z2 621 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 FAM13CQ8NE31 585 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 AGBL3Q8NEM8 1001 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 PHKBQ93100 1093 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 GOLPH3LQ9H4A5 285 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 CAAP1Q9H8G2 361 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 MYOZ2Q9NPC6 264 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 ARHGEF4Q9NR80 690 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 AATFQ9NY61 560 aaKnown RBP eCLIP9.28□□□□□ -0.92
SFXN1-211ENST00000515736 TJP2Q9UDY2 1190 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 GAKO14976 1311 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 MYO3BQ8WXR4 1341 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 SYNGAP1Q96PV0 1343 aa9.28□□□□□ -0.92
SFXN1-211ENST00000515736 PLIN4Q96Q06 1357 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 GPR75-ASB3A0A0A6YYF3 556 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 TSPY2A6NKD2 308 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 SMTNL1A8MU46 457 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 BECN2A8MW95 431 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 IKBKBO14920 756 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 PLD2O14939 933 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 LILRB5O75023 590 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 OFD1O75665 1012 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 ZNF202O95125 648 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 PFKFB1P16118 471 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 KLRK1P26718 216 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 KRT2P35908 639 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 SYKP43405 635 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 PMS1P54277 932 aaKnown RBP9.27□□□□□ -0.93
SFXN1-211ENST00000515736 YARSP54577 528 aaKnown RBP9.27□□□□□ -0.93
SFXN1-211ENST00000515736 SOX10P56693 466 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 NLRP12P59046 1061 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 ZNF280AP59817 542 aaPredicted RBP9.27□□□□□ -0.93
SFXN1-211ENST00000515736 DYNLL1P63167 89 aaKnown RBP9.27□□□□□ -0.93
SFXN1-211ENST00000515736 SV2CQ496J9 727 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 FNDC3BQ53EP0 1204 aaKnown RBP9.27□□□□□ -0.93
SFXN1-211ENST00000515736 PPM1JQ5JR12 505 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 PLA2G4DQ86XP0 818 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 RASAL3Q86YV0 1011 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 GALNT11Q8NCW6 608 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 NUP133Q8WUM0 1156 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 FERMT2Q96AC1 680 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 DHRS1Q96LJ7 313 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 DHRS4Q9BTZ2 278 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 PHF20Q9BVI0 1012 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 COA1Q9GZY4 146 aa9.27□□□□□ -0.93
SFXN1-211ENST00000515736 CD209Q9NNX6 404 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms