RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RSPH10BP0C881 870 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 GLRA2P23416 452 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 CLCN3P51790 818 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 NCKAP1LP55160 1127 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 ZNF200P98182 395 aaPredicted RBP13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 LAMTOR4Q0VGL1 99 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 COASYQ13057 564 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 DRP2Q13474 957 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 ALCAMQ13740 583 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 TFDP1Q14186 410 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 CAMK4Q16566 473 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 COBLL1Q53SF7 1204 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 FAM26DQ5JW98 314 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 FAM102BQ5T8I3 360 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 CDCA2Q69YH5 1023 aaPredicted RBP13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 CAVIN1Q6NZI2 390 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 RUFY4Q6ZNE9 571 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 RSPH3Q86UC2 560 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 LRRC71Q8N4P6 559 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 METTL13Q8N6R0 699 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 DHX38Q92620 1227 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 TMEM143Q96AN5 459 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 IFT74Q96LB3 600 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 STRA6Q9BX79 667 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 GPRC5CQ9NQ84 441 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 DCDC2CA8MYV0 355 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 IDEP14735 1019 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 CASP1P29466 404 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 NPTX2P47972 431 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 GPC3P51654 580 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 SMTNP53814 917 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 RAD51AP2Q09MP3 1159 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 DMP1Q13316 513 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 CAPSQ13938 189 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 MORC3Q14149 939 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 PCBP1Q15365 356 aaKnown RBP eCLIP13.23□□□□□ -0.295e-8■■■■■ 41.6
PDLIM5-220ENST00000514830 KMT5BQ4FZB7 885 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 ODR4Q5SWX8 454 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 CCDC155Q8N6L0 562 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 ASAP3Q8TDY4 903 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 PPP1R13LQ8WUF5 828 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 BSNDQ8WZ55 320 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 HVCN1Q96D96 273 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 TRPV6Q9H1D0 765 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 ADAMTS10Q9H324 1103 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 TRMT13Q9NUP7 481 aaKnown RBP13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 EXOC1Q9NV70 894 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 ARHGAP28Q9P2N2 729 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 SQORQ9Y6N5 450 aa13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 MKI67P46013 3256 aaKnown RBP13.23□□□□□ -0.29
PDLIM5-220ENST00000514830 UBE4BO95155 1302 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 EIF3DO15371 548 aaKnown RBP eCLIP13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 GPR32O75388 356 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 PPP1R37O75864 691 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 EFNA5P52803 228 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 PTENP60484 403 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 MRPS6P82932 125 aaKnown RBP13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 GTF2BQ00403 316 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 TLE2Q04725 743 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 MGAT3Q09327 533 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 LRRC26Q2I0M4 334 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 HERC4Q5GLZ8 1057 aaPredicted RBP13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 FAM26FQ5R3K3 315 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 ZNF658Q5TYW1 1059 aaPredicted RBP13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 EPM2AIP1Q7L775 607 aaPredicted RBP13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 ZNF720Q7Z2F6 126 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 SFR1Q86XK3 245 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 RHPN2Q8IUC4 686 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 FAM178BQ8IXR5 827 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 MYCT1Q8N699 235 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 DNAJB3Q8WWF6 145 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 WNT8BQ93098 351 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 ZBTB10Q96DT7 871 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 C2orf40Q9H1Z8 148 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 TMEM134Q9H6X4 195 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 IFT122Q9HBG6 1241 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 TBX21Q9UL17 535 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 NOD1Q9Y239 953 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 AKT3Q9Y243 479 aa13.22□□□□□ -0.29
PDLIM5-220ENST00000514830 A0A1W2PPC1 479 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 SFI1A8K8P3 1242 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 PARNO95453 639 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 PPP1R2P41236 205 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 PHKA2P46019 1235 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 CRYBB1P53674 252 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 ATN1P54259 1190 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 PEX3P56589 373 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 FAAP100Q0VG06 881 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 BFSP2Q13515 415 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 FAM187BQ17R55 369 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 BMT2Q1RMZ1 405 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 TRIM60Q495X7 471 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 STXBP4Q6ZWJ1 553 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 MAEAQ7L5Y9 396 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 SRGAP1Q7Z6B7 1085 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 TMEM161BQ8NDZ6 487 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 CELF4Q9BZC1 486 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms