RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 LGR5O75473 907 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 PGK2P07205 417 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 PLS3P13797 630 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 MCCD1P59942 119 aaPredicted RBP10.89□□□□□ -0.67
TPM3-221ENST00000513769 KCNJ12Q14500 433 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 HSP90AA2PQ14568 343 aaPredicted RBP10.89□□□□□ -0.67
TPM3-221ENST00000513769 TAF1CQ15572 869 aaPredicted RBP10.89□□□□□ -0.67
TPM3-221ENST00000513769 ZCWPW2Q504Y3 356 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 XKR9Q5GH70 373 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 ZNF697Q5TEC3 545 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 SPECC1LQ69YQ0 1117 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 ANO5Q75V66 913 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 APTXQ7Z2E3 356 aaKnown RBP10.89□□□□□ -0.67
TPM3-221ENST00000513769 CCDC186Q7Z3E2 898 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 VSTM4Q8IW00 320 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 LRRC8AQ8IWT6 810 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 FAM178BQ8IXR5 827 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 ZC3H3Q8IXZ2 948 aaKnown RBP10.89□□□□□ -0.67
TPM3-221ENST00000513769 DHX37Q8IY37 1157 aaKnown RBP10.89□□□□□ -0.67
TPM3-221ENST00000513769 RETREG2Q8NC44 543 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 SPIRE2Q8WWL2 714 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 HVCN1Q96D96 273 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 FGD4Q96M96 766 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 CCDC43Q96MW1 224 aaKnown RBP10.89□□□□□ -0.67
TPM3-221ENST00000513769 JPH2Q9BR39 696 aaPredicted RBP10.89□□□□□ -0.67
TPM3-221ENST00000513769 TINF2Q9BSI4 451 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 RUSC1Q9BVN2 902 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 SMARCAD1Q9H4L7 1026 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 AZI2Q9H6S1 392 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 METTL14Q9HCE5 456 aaKnown RBP10.89□□□□□ -0.67
TPM3-221ENST00000513769 TYW1Q9NV66 732 aaKnown RBP10.89□□□□□ -0.67
TPM3-221ENST00000513769 FAM184BQ9ULE4 1060 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 Q9Y3F1 56 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 ITIH6Q6UXX5 1313 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 BACH1O14867 736 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 TXNP10599 105 aaKnown RBP10.88□□□□□ -0.67
TPM3-221ENST00000513769 CD46P15529 392 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 UBA1P22314 1058 aaKnown RBP10.88□□□□□ -0.67
TPM3-221ENST00000513769 RFC5P40937 340 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 GTF2BQ00403 316 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 ADAM9Q13443 819 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 ODR4Q5SWX8 454 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 TAPT1Q6NXT6 567 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 ARMCX2Q7L311 632 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 FRMD5Q7Z6J6 570 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 SLC9A9Q8IVB4 645 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 TRMT44Q8IYL2 757 aaKnown RBP10.88□□□□□ -0.67
TPM3-221ENST00000513769 MAML3Q96JK9 1138 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 CEP170P1Q96L14 293 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 TUBGCP2Q9BSJ2 902 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 ZHX3Q9H4I2 956 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 CYP26B1Q9NR63 512 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 PKD2L1Q9P0L9 805 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 NRBP1Q9UHY1 535 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 EXOC7Q9UPT5 735 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 ZKSCAN5Q9Y2L8 839 aa10.88□□□□□ -0.67
TPM3-221ENST00000513769 PHLPP2Q6ZVD8 1323 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 ADGRA2Q96PE1 1338 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 NPHP3-ACAD11A0A0J9YXS1 232 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 ESPNB1AK53 854 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 IGF2BP3O00425 579 aaKnown RBP eCLIP10.87□□□□□ -0.67
TPM3-221ENST00000513769 NOP56O00567 594 aaKnown RBP10.87□□□□□ -0.67
TPM3-221ENST00000513769 MAPK13O15264 365 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 ASAP2O43150 1006 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 ZNF862O60290 1169 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 PEX10O60683 326 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 GGPS1O95749 300 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 GH1P01241 217 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 TPM1P09493 284 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 XRCC5P13010 732 aaKnown RBP10.87□□□□□ -0.67
TPM3-221ENST00000513769 MSNP26038 577 aaKnown RBP10.87□□□□□ -0.67
TPM3-221ENST00000513769 COPB1P53618 953 aaKnown RBP10.87□□□□□ -0.67
TPM3-221ENST00000513769 PMS1P54277 932 aaKnown RBP10.87□□□□□ -0.67
TPM3-221ENST00000513769 TBX2Q13207 712 aaPredicted RBP10.87□□□□□ -0.67
TPM3-221ENST00000513769 TRIM14Q14142 442 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 PPP2R5AQ15172 486 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 KRT31Q15323 416 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 TARBP2Q15633 366 aaKnown RBP10.87□□□□□ -0.67
TPM3-221ENST00000513769 LY6KQ17RY6 165 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 OLFML2BQ68BL8 750 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 HS2ST1Q7LGA3 356 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 SFR1Q86XK3 245 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 C12orf56Q8IXR9 622 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 CCDC150Q8NCX0 1101 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 CCDC112Q8NEF3 446 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 USP6NLQ92738 828 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 CCDC51Q96ER9 411 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 FIZ1Q96SL8 496 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 GPR20Q99678 358 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 MKNK1Q9BUB5 465 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 CFHR5Q9BXR6 569 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 EDEM3Q9BZQ6 932 aa10.87□□□□□ -0.67
TPM3-221ENST00000513769 DHX33Q9H6R0 707 aaKnown RBP10.87□□□□□ -0.67
TPM3-221ENST00000513769 EMSYQ7Z589 1322 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 IGSF9BQ9UPX0 1349 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 SFI1A8K8P3 1242 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 HBP1O60381 514 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 HIP1RO75146 1068 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 TRPA1O75762 1119 aa10.86□□□□□ -0.67
TPM3-221ENST00000513769 GCNT3O95395 438 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms