RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 THNSL1Q8IYQ7 743 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 EFHBQ8N7U6 833 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 NECAB1Q8N987 351 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 OXER1Q8TDS5 423 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 POF1BQ8WVV4 589 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 TCP11Q8WWU5 503 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 PRPF31Q8WWY3 499 aaKnown RBP8.17□□□□□ -1.1
HTT-212ENST00000513639 HAS1Q92839 578 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 PGBD4Q96DM1 585 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 CEP170P1Q96L14 293 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 ZSCAN31Q96LW9 406 aaPredicted RBP8.17□□□□□ -1.1
HTT-212ENST00000513639 NECAB3Q96P71 396 aaPredicted RBP8.17□□□□□ -1.1
HTT-212ENST00000513639 CASD1Q96PB1 797 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 CEP89Q96ST8 783 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 CDCA3Q99618 268 aaPredicted RBP8.17□□□□□ -1.1
HTT-212ENST00000513639 LLPHQ9BRT6 129 aaKnown RBP8.17□□□□□ -1.1
HTT-212ENST00000513639 TLE6Q9H808 572 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 NGRNQ9NPE2 291 aaKnown RBP8.17□□□□□ -1.1
HTT-212ENST00000513639 COL4A6Q14031 1691 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 A0A087WZ62 844 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 BTBD18B2RXH4 712 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 PI4K2BG5E9Z4 385 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 EML1O00423 815 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 ZNF623O75123 536 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 FGF18O76093 207 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 SLITRK3O94933 977 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 SRGAP2BP0DMP2 458 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 YWHABP31946 246 aaKnown RBP8.16□□□□□ -1.1
HTT-212ENST00000513639 LTBRP36941 435 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 POLGP54098 1239 aaPredicted RBP8.16□□□□□ -1.1
HTT-212ENST00000513639 CAMK1Q14012 370 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 MXD4Q14582 209 aaPredicted RBP8.16□□□□□ -1.1
HTT-212ENST00000513639 CALCRLQ16602 461 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 TWF2Q6IBS0 349 aaKnown RBP8.16□□□□□ -1.1
HTT-212ENST00000513639 CATSPER4Q7RTX7 472 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 SRGAP1Q7Z6B7 1085 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 TPH2Q8IWU9 490 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 COLGALT1Q8NBJ5 622 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 RNF169Q8NCN4 708 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 NSUN7Q8NE18 718 aaKnown RBP8.16□□□□□ -1.1
HTT-212ENST00000513639 PSPC1Q8WXF1 523 aaKnown RBP8.16□□□□□ -1.1
HTT-212ENST00000513639 ZNF558Q96NG5 402 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 POP1Q99575 1024 aaKnown RBP8.16□□□□□ -1.1
HTT-212ENST00000513639 HSD17B14Q9BPX1 270 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 FDXACB1Q9BRP7 624 aaPredicted RBP8.16□□□□□ -1.1
HTT-212ENST00000513639 MRPL9Q9BYD2 267 aaKnown RBP8.16□□□□□ -1.1
HTT-212ENST00000513639 TLR9Q9NR96 1032 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 SPG21Q9NZD8 308 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 DAXXQ9UER7 740 aaPredicted RBP8.16□□□□□ -1.1
HTT-212ENST00000513639 STK39Q9UEW8 545 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 VAV3Q9UKW4 847 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 STK24Q9Y6E0 443 aa8.16□□□□□ -1.1
HTT-212ENST00000513639 MYH9P35579 1960 aaKnown RBP8.15□□□□□ -1.1
HTT-212ENST00000513639 RBAK-RBAKDNI3L0D1 243 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 GPR37L1O60883 481 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 LYPLA2O95372 231 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 EYA4O95677 639 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 SRGAP2CP0DJJ0 459 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 FGFR1P11362 822 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 DNAJB1P25685 340 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 PHKA2P46019 1235 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 NRIP1P48552 1158 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 RBM25P49756 843 aaKnown RBP8.15□□□□□ -1.1
HTT-212ENST00000513639 NDUFV1P49821 464 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 GATMP50440 423 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 FXR2P51116 673 aaKnown RBP eCLIP8.15□□□□□ -1.1
HTT-212ENST00000513639 RAB27AP51159 221 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 NPEPPSP55786 919 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 POU5F1BQ06416 359 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 LAMTOR4Q0VGL1 99 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 NR5A1Q13285 461 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 SMAD2Q15796 467 aaKnown RBP8.15□□□□□ -1.1
HTT-212ENST00000513639 XKR9Q5GH70 373 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 TMEM31Q5JXX7 168 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 NCAPH2Q6IBW4 605 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 KCNT2Q6UVM3 1135 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 GLB1LQ6UWU2 654 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 TMC7Q7Z402 723 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 ZNF598Q86UK7 904 aaKnown RBP8.15□□□□□ -1.1
HTT-212ENST00000513639 ADHFE1Q8IWW8 467 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 DIS3L2Q8IYB7 885 aaKnown RBP8.15□□□□□ -1.1
HTT-212ENST00000513639 LRRC43Q8N309 656 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 TMEM87AQ8NBN3 555 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 CNNM3Q8NE01 707 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 MRPS27Q92552 414 aaKnown RBP8.15□□□□□ -1.1
HTT-212ENST00000513639 TNFRSF25Q93038 417 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 ZNF668Q96K58 619 aaPredicted RBP8.15□□□□□ -1.1
HTT-212ENST00000513639 SH2D3AQ9BRG2 576 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 LXNQ9BS40 222 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 DHX33Q9H6R0 707 aaKnown RBP8.15□□□□□ -1.1
HTT-212ENST00000513639 CWH43Q9H720 699 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 TTC12Q9H892 705 aaPredicted RBP8.15□□□□□ -1.1
HTT-212ENST00000513639 UBN1Q9NPG3 1134 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 SH2B1Q9NRF2 756 aaPredicted RBP8.15□□□□□ -1.1
HTT-212ENST00000513639 GJB4Q9NTQ9 266 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 ANKEF1Q9NU02 776 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 RGL1Q9NZL6 768 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 KANSL3Q9P2N6 904 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 CD207Q9UJ71 328 aa8.15□□□□□ -1.1
HTT-212ENST00000513639 COL4A3BPQ9Y5P4 624 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms