RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ZSWIM8A7E2V4 1837 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 EMSYQ7Z589 1322 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 KIAA0391O15091 583 aaKnown RBP9.16□□□□□ -0.94
RNF4-220ENST00000513578 CLIC2O15247 247 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 GAS2O43903 313 aaKnown RBP9.16□□□□□ -0.94
RNF4-220ENST00000513578 ANXA13P27216 316 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 ARL2P36404 184 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 NPTX2P47972 431 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 CASP4P49662 377 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 PEX3P56589 373 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 DMP1Q13316 513 aaPredicted RBP9.16□□□□□ -0.94
RNF4-220ENST00000513578 HSP90AA2PQ14568 343 aaPredicted RBP9.16□□□□□ -0.94
RNF4-220ENST00000513578 CELF3Q5SZQ8 465 aaKnown RBP9.16□□□□□ -0.94
RNF4-220ENST00000513578 FAM102BQ5T8I3 360 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 UTP14CQ5TAP6 766 aaKnown RBP9.16□□□□□ -0.94
RNF4-220ENST00000513578 PLA2G4FQ68DD2 849 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 MAMDC4Q6UXC1 1216 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 GBP6Q6ZN66 633 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 INTS8Q75QN2 995 aaKnown RBP9.16□□□□□ -0.94
RNF4-220ENST00000513578 SYCP3Q8IZU3 236 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 SMCR8Q8TEV9 937 aaPredicted RBP9.16□□□□□ -0.94
RNF4-220ENST00000513578 VTI1AQ96AJ9 217 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 PCYT2Q99447 389 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 PARK7Q99497 189 aaKnown RBP9.16□□□□□ -0.94
RNF4-220ENST00000513578 PORCNQ9H237 461 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 GANQ9H2C0 597 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 R3HDMLQ9H3Y0 253 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 HAUS4Q9H6D7 363 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 POLD4Q9HCU8 107 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 VTA1Q9NP79 307 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 KMT5AQ9NQR1 393 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 AIPL1Q9NZN9 384 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.16□□□□□ -0.94
RNF4-220ENST00000513578 ARHGAP28Q9P2N2 729 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
RNF4-220ENST00000513578 TBX20Q9UMR3 447 aa9.16□□□□□ -0.94
RNF4-220ENST00000513578 ATP8B3O60423 1300 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 TMEM150BA6NC51 233 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 DYNC1I1O14576 645 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 EPHB6O15197 1021 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 SLC16A4O15374 487 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 CTIFO43310 598 aaKnown RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 N4BP1O75113 896 aaKnown RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 MAFO75444 373 aaPredicted RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 CELF2O95319 508 aaKnown RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 GGPS1O95749 300 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 ITGBL1O95965 494 aaPredicted RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 PIGRP01833 764 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 PGK2P07205 417 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 ATXN8OSP0DMR3 200 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 CYP2C8P10632 490 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 GARTP22102 1010 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 RFX1P22670 979 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 PON1P27169 355 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 ARHGAP25P42331 645 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 NAMPTP43490 491 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 STAT5BP51692 787 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 HTRA3P83110 453 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 TUBB2AQ13885 445 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 TTLL4Q14679 1199 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 EMC2Q15006 297 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 EXOC3L4Q17RC7 722 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 FAM110CQ1W6H9 321 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 ASTE1Q2TB18 679 aaPredicted RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 BRDTQ58F21 947 aaPredicted RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 KLHDC7AQ5VTJ3 777 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 CACNA2D4Q7Z3S7 1137 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 FMNL3Q8IVF7 1028 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 MSL3Q8N5Y2 521 aaKnown RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 XXYLT1Q8NBI6 393 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 SCFD2Q8WU76 684 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 BBXQ8WY36 941 aaPredicted RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 EMID1Q96A84 441 aaPredicted RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 IFT74Q96LB3 600 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 FBXL18Q96ME1 805 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 GPR20Q99678 358 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 TUBB2BQ9BVA1 445 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 LSM14BQ9BX40 385 aaKnown RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 TMEM134Q9H6X4 195 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 NHEJ1Q9H9Q4 299 aaPredicted RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 MLXIPQ9HAP2 919 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 GPRC5CQ9NQ84 441 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 FAM207AQ9NSI2 230 aaPredicted RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 REXO2Q9Y3B8 237 aaKnown RBP9.15□□□□□ -0.94
RNF4-220ENST00000513578 TELO2Q9Y4R8 837 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 STYXL1Q9Y6J8 313 aa9.15□□□□□ -0.94
RNF4-220ENST00000513578 ADGRA2Q96PE1 1338 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 IGKV6-21A0A0C4DH24 114 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 DENND3A2RUS2 1198 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 LRRC53A6NM62 1247 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 RBAK-RBAKDNI3L0D1 243 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 RIOK3O14730 519 aaKnown RBP9.14□□□□□ -0.95
RNF4-220ENST00000513578 PJA2O43164 708 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 EXOC3O60645 756 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 ARIH2O95376 493 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 SERPING1P05155 500 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 KRT13P13646 458 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 CNGA1P29973 690 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 MAPK4P31152 587 aa9.14□□□□□ -0.95
RNF4-220ENST00000513578 TCF7P36402 384 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms