RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-231ENST00000513098 TLE6Q9H808 572 aa14.08□□□□□ -0.16
UBE2D3-231ENST00000513098 CYP26B1Q9NR63 512 aa14.08□□□□□ -0.16
UBE2D3-231ENST00000513098 GJB4Q9NTQ9 266 aa14.08□□□□□ -0.16
UBE2D3-231ENST00000513098 SUCLA2Q9P2R7 463 aaPredicted RBP14.08□□□□□ -0.16
UBE2D3-231ENST00000513098 PUF60Q9UHX1 559 aaKnown RBP14.08□□□□□ -0.16
UBE2D3-231ENST00000513098 PLXNA4Q9HCM2 1894 aa14.08□□□□□ -0.16
UBE2D3-231ENST00000513098 A0A087WZ62 844 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 CARNS1A5YM72 827 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 TMEM150BA6NC51 233 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 CCNT1O60563 726 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 SKIP12755 728 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 ATF7P17544 494 aaPredicted RBP14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 SFPQP23246 707 aaKnown RBP eCLIP14.07□□□□□ -0.163e-6■□□□□ 10.5
UBE2D3-231ENST00000513098 SSTR3P32745 418 aaPredicted RBP14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 PPM1AP35813 382 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 ERVFC1P60507 584 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 SPIRE1Q08AE8 756 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 KCNC3Q14003 757 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 EARS2Q5JPH6 523 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 CLLU1OSQ5K130 101 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 SPOUT1Q5T280 376 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 KCNT2Q6UVM3 1135 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 PIK3AP1Q6ZUJ8 805 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 THNSL1Q8IYQ7 743 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 LRRC43Q8N309 656 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 SMRP1Q8NCR6 262 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 POP1Q99575 1024 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 FDXACB1Q9BRP7 624 aaPredicted RBP14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 DHX33Q9H6R0 707 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 IFT122Q9HBG6 1241 aa14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 NGRNQ9NPE2 291 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-231ENST00000513098 GAS2O43903 313 aaKnown RBP14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 GLP2RO95838 553 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 RFC5P40937 340 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 PHKA2P46019 1235 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 NRIP1P48552 1158 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 KRT17Q04695 432 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 DUSP6Q16828 381 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 OTUD6AQ7L8S5 288 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 RHPN2Q8IUC4 686 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 ABI1Q8IZP0 508 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 MICAL1Q8TDZ2 1067 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 SLC7A3Q8WY07 619 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 ZNF668Q96K58 619 aaPredicted RBP14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 SCLT1Q96NL6 688 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 HSD17B14Q9BPX1 270 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 SH2D3AQ9BRG2 576 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 WRAP73Q9P2S5 460 aaPredicted RBP14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 HCSTQ9UBK5 93 aa14.06□□□□□ -0.16
UBE2D3-231ENST00000513098 PRR33A8MZF0 331 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 ASAP2O43150 1006 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 DCXO43602 365 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 SLITRK3O94933 977 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 LYPLA2O95372 231 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 BAG4O95429 457 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 IBSPP21815 317 aaPredicted RBP14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 FGFR4P22455 802 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 KRT2P35908 639 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 NDUFV1P49821 464 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 NPEPPSP55786 919 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 NR5A1Q13285 461 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 PCBP1Q15365 356 aaKnown RBP eCLIP14.05□□□□□ -0.169e-7■□□□□ 10.8
UBE2D3-231ENST00000513098 SRGAP1Q7Z6B7 1085 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 NECAB1Q8N987 351 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 ZNF579Q8NAF0 562 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 NSUN7Q8NE18 718 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 PRPF31Q8WWY3 499 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 CEP170P1Q96L14 293 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 ZNF558Q96NG5 402 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 MRPL9Q9BYD2 267 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 ZSWIM4Q9H7M6 989 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 BRMS1Q9HCU9 246 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 SPG21Q9NZD8 308 aa14.05□□□□□ -0.16
UBE2D3-231ENST00000513098 YWHABP31946 246 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 RAB27AP51159 221 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 NEK4P51957 841 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 POU5F1BQ06416 359 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 CBX2Q14781 532 aaPredicted RBP14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 PLA2G4FQ68DD2 849 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 MRPL10Q7Z7H8 261 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 RBM23Q86U06 439 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 POTEDQ86YR6 584 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 KSR1Q8IVT5 923 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 SLC39A11Q8N1S5 342 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 SUSD6Q92537 303 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 LXNQ9BS40 222 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 RAPGEFL1Q9UHV5 662 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 PCDHA12Q9UN75 941 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 PCDHGC5Q9Y5F6 944 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 COL4A3BPQ9Y5P4 624 aa14.04□□□□□ -0.16
UBE2D3-231ENST00000513098 PER2O15055 1255 aa14.03□□□□□ -0.16
UBE2D3-231ENST00000513098 MARCH6O60337 910 aa14.03□□□□□ -0.16
UBE2D3-231ENST00000513098 LARGE1O95461 756 aa14.03□□□□□ -0.16
UBE2D3-231ENST00000513098 XRCC6P12956 609 aaKnown RBP eCLIP14.03□□□□□ -0.16
UBE2D3-231ENST00000513098 HOXA11P31270 313 aaPredicted RBP14.03□□□□□ -0.16
UBE2D3-231ENST00000513098 ALDH7A1P49419 539 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-231ENST00000513098 LAMTOR4Q0VGL1 99 aa14.03□□□□□ -0.16
UBE2D3-231ENST00000513098 CLUL1Q15846 466 aa14.03□□□□□ -0.16
UBE2D3-231ENST00000513098 HERC4Q5GLZ8 1057 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms