RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 NUMBLQ9Y6R0 609 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 TSPOAP1O95153 1857 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 A0A0G2JNJ9 132 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 PRSS38A1L453 326 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 K7ESF4 209 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 CUTAO60888 179 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 HMGCRP04035 888 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 IL13P35225 146 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 SARSP49591 514 aaKnown RBP5.46□□□□□ -1.54
HTT-210ENST00000512909 KCNQ1P51787 676 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 LGALS4P56470 323 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 SESN2P58004 480 aaPredicted RBP5.46□□□□□ -1.54
HTT-210ENST00000512909 IL13RA1P78552 427 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 MRPS9P82933 396 aaKnown RBP5.46□□□□□ -1.54
HTT-210ENST00000512909 CDK17Q00537 523 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 CD83Q01151 205 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 ADAM9Q13443 819 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 MOGSQ13724 837 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 CIAPIN1Q6FI81 312 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 PROSER1Q86XN7 944 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 GLB1L2Q8IW92 636 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 CHPFQ8IZ52 775 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 MIER2Q8N344 545 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 GAB3Q8WWW8 586 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 SSH1Q8WYL5 1049 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 DYDC2Q96IM9 177 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 NOX5Q96PH1 765 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 AMNQ9BXJ7 453 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 TRIM8Q9BZR9 551 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 CSRNP2Q9H175 543 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 KCTD10Q9H3F6 313 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 CCM2LQ9NUG4 571 aaPredicted RBP5.46□□□□□ -1.54
HTT-210ENST00000512909 Q9UFV3 132 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 DPP7Q9UHL4 492 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 SMG5Q9UPR3 1016 aaKnown RBP5.46□□□□□ -1.54
HTT-210ENST00000512909 PPP2R3BQ9Y5P8 575 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 GPR45Q9Y5Y3 372 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 MAPKBP1O60336 1514 aa5.46□□□□□ -1.54
HTT-210ENST00000512909 EPRSP07814 1512 aaKnown RBP5.46□□□□□ -1.54
HTT-210ENST00000512909 KDM5BQ9UGL1 1544 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 GOLGA6CA6NDK9 693 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 GOLGA6BA6NDN3 693 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 DDX3XO00571 662 aaKnown RBP eCLIP5.45□□□□□ -1.54
HTT-210ENST00000512909 NUAK1O60285 661 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 H2AFYO75367 372 aaKnown RBP5.45□□□□□ -1.54
HTT-210ENST00000512909 FSBPO95073 299 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 GOLGA6DP0CG33 693 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 IGFBP6P24592 240 aaPredicted RBP5.45□□□□□ -1.54
HTT-210ENST00000512909 THBS2P35442 1172 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 GPR15P49685 360 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 AFF3P51826 1226 aaKnown RBP5.45□□□□□ -1.54
HTT-210ENST00000512909 ERVK-21P61565 698 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 SRSF2Q01130 221 aaKnown RBP5.45□□□□□ -1.54
HTT-210ENST00000512909 PIN1Q13526 163 aaPredicted RBP5.45□□□□□ -1.54
HTT-210ENST00000512909 MYBPC3Q14896 1274 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 PDCD1Q15116 288 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 NOL8Q76FK4 1167 aaKnown RBP5.45□□□□□ -1.54
HTT-210ENST00000512909 BMP8AQ7Z5Y6 402 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 FAM129CQ86XR2 697 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 FMNL3Q8IVF7 1028 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 OR5AN1Q8NGI8 311 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 FNIP1Q8TF40 1166 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 UIMC1Q96RL1 719 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 ADI1Q9BV57 179 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 ACE2Q9BYF1 805 aaPredicted RBP5.45□□□□□ -1.54
HTT-210ENST00000512909 GCM1Q9NP62 436 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 POLR3BQ9NW08 1133 aaPredicted RBP5.45□□□□□ -1.54
HTT-210ENST00000512909 GOLGA6AQ9NYA3 693 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 ZIM2Q9NZV7 527 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 CDC42EP3Q9UKI2 254 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 GIT1Q9Y2X7 761 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 ZDHHC9Q9Y397 364 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 TNKSO95271 1327 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 WDR7Q9Y4E6 1490 aa5.45□□□□□ -1.54
HTT-210ENST00000512909 CTTNBP2Q8WZ74 1663 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 NPIPB6E9PJ23 425 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 ELL2O00472 640 aaPredicted RBP5.44□□□□□ -1.54
HTT-210ENST00000512909 MPIG6BO95866 241 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 C1QTNF9P0C862 333 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 RBP3P10745 1247 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 OSMP13725 252 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 ZSCAN20P17040 1043 aaPredicted RBP5.44□□□□□ -1.54
HTT-210ENST00000512909 RPL13P26373 211 aaKnown RBP5.44□□□□□ -1.54
HTT-210ENST00000512909 TXKP42681 527 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 RAB27AP51159 221 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 CCT2P78371 535 aaKnown RBP5.44□□□□□ -1.54
HTT-210ENST00000512909 PCBP2Q15366 365 aaKnown RBP eCLIP5.44□□□□□ -1.54
HTT-210ENST00000512909 KCNA10Q16322 511 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 CCDC178Q5BJE1 867 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 ZNF648Q5T619 568 aaPredicted RBP5.44□□□□□ -1.54
HTT-210ENST00000512909 TCERG1LQ5VWI1 586 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 CMIPQ8IY22 773 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 PPM1NQ8N819 430 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 LINC00482Q8N8I6 264 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 GCDHQ92947 438 aaPredicted RBP5.44□□□□□ -1.54
HTT-210ENST00000512909 FATE1Q969F0 183 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 SYT3Q9BQG1 590 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 SLC13A1Q9BZW2 595 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 SEMA4AQ9H3S1 761 aa5.44□□□□□ -1.54
HTT-210ENST00000512909 IFT122Q9HBG6 1241 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms