RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 PTPROQ16827 1216 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 TCTN1Q2MV58 587 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 FAM26DQ5JW98 314 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 TAF2Q6P1X5 1199 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
USP46-208ENST00000512656 SRBD1Q8N5C6 995 aaKnown RBP8.22□□□□□ -1.09
USP46-208ENST00000512656 FANCBQ8NB91 859 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 SEPT1Q8WYJ6 367 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 MYL10Q9BUA6 226 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 IFIH1Q9BYX4 1025 aaKnown RBP8.22□□□□□ -1.09
USP46-208ENST00000512656 LSG1Q9H089 658 aaKnown RBP8.22□□□□□ -1.09
USP46-208ENST00000512656 SMARCAD1Q9H4L7 1026 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 BCAS3Q9H6U6 928 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 ERAP1Q9NZ08 941 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 USP3Q9Y6I4 520 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 MYH7BA7E2Y1 1941 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 PIEZO1Q92508 2521 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 ADH6P28332 368 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 TCF7P36402 384 aaPredicted RBP8.21□□□□□ -1.1
USP46-208ENST00000512656 IRX6P78412 446 aaPredicted RBP8.21□□□□□ -1.1
USP46-208ENST00000512656 PPFIA1Q13136 1202 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 TIGD5Q53EQ6 642 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 CREB3L3Q68CJ9 461 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 TMTC3Q6ZXV5 915 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 HEATR3Q7Z4Q2 680 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 SPRED2Q7Z698 418 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 RPAINQ86UA6 219 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 SGMS1Q86VZ5 419 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 LMBR1Q8WVP7 490 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 GLG1Q92896 1179 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 TOP1MTQ969P6 601 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 MRPL38Q96DV4 380 aaKnown RBP8.21□□□□□ -1.1
USP46-208ENST00000512656 GLT8D2Q9H1C3 349 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 AZI2Q9H6S1 392 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 UBE2ZQ9H832 354 aaPredicted RBP8.21□□□□□ -1.1
USP46-208ENST00000512656 ANO2Q9NQ90 1003 aa8.21□□□□□ -1.1
USP46-208ENST00000512656 RBM28Q9NW13 759 aaKnown RBP8.21□□□□□ -1.1
USP46-208ENST00000512656 RRN3P2A6NIE6 340 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 M0R2N6 131 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 FOSP01100 380 aaPredicted RBP8.2□□□□□ -1.1
USP46-208ENST00000512656 KCNA2P16389 499 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 HOXB4P17483 251 aaPredicted RBP8.2□□□□□ -1.1
USP46-208ENST00000512656 RXRAP19793 462 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 ADAM17P78536 824 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 GPM6BQ13491 265 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 NECTIN1Q15223 517 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 GRIK4Q16099 956 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 EPC2Q52LR7 807 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 LINC00114Q6XXX2 140 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 FAM43BQ6ZT52 329 aaPredicted RBP8.2□□□□□ -1.1
USP46-208ENST00000512656 MICU3Q86XE3 530 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 TMEM192Q8IY95 271 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 CMTR1Q8N1G2 835 aaKnown RBP8.2□□□□□ -1.1
USP46-208ENST00000512656 CCDC82Q8N4S0 544 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.2□□□□□ -1.1
USP46-208ENST00000512656 IL17RAQ96F46 866 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 BTBD6Q96KE9 485 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 NECAB3Q96P71 396 aaPredicted RBP8.2□□□□□ -1.1
USP46-208ENST00000512656 SDF4Q9BRK5 362 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 C17orf80Q9BSJ5 609 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 JADE2Q9NQC1 790 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 TUBE1Q9UJT0 475 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 PCDHA6Q9UN73 950 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 FAM50BQ9Y247 325 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 RWDD3Q9Y3V2 267 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 PCDHA8Q9Y5H6 950 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 UBIAD1Q9Y5Z9 338 aa8.2□□□□□ -1.1
USP46-208ENST00000512656 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.19□□□□□ -1.1
USP46-208ENST00000512656 GSTTP1A0A1W2PQM5 241 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 hCG_1642624A0A1W2PR95 340 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 MBLAC1A4D2B0 266 aaPredicted RBP8.19□□□□□ -1.1
USP46-208ENST00000512656 H3BNC9 293 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 hCG_1984214I3L0E3 225 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 M0QZ92 97 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 EML1O00423 815 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 GNB5O14775 395 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 KHNYNO15037 678 aaKnown RBP8.19□□□□□ -1.1
USP46-208ENST00000512656 EFSO43281 561 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 NCK2O43639 380 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 ATP9AO75110 1047 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 RB1P06400 928 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 GHRP10912 638 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 ITGB5P18084 799 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 AMPD1P23109 780 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 MARK3P27448 753 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 NOS2P35228 1153 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 NAPAP54920 295 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 KRT32Q14532 448 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 UBE2SQ16763 222 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 LEXMQ3ZCV2 418 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 BMP2KLQ5H9B9 411 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 ZNF468Q5VIY5 522 aaPredicted RBP8.19□□□□□ -1.1
USP46-208ENST00000512656 IER5Q5VY09 327 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 FIBCD1Q8N539 461 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 ZNF713Q8N859 430 aaPredicted RBP8.19□□□□□ -1.1
USP46-208ENST00000512656 NEK1Q96PY6 1258 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 SPOCK3Q9BQ16 436 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 MXRA8Q9BRK3 442 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 LRRC2Q9BYS8 371 aa8.19□□□□□ -1.1
USP46-208ENST00000512656 JPH1Q9HDC5 661 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms